Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1567 ATGCAGTGCCTAGTCAAAGGGGAAACAGCAGGCCTAATAAAAGACCAACTCCAAAGTCGAAAGTCCATAAAGAGAAAAGTGAGTGACAGTCCTCTTTTTTTCTTTTACAGCTTTAATGGTAGATTCCAAATGGGGCTTCTAGACTTGTTCTTTGTTGCTTCAATGCCGGTTATCAAAGTTCTGTTGGTCACCGCAGTTGGTTCATTTATTGCCTTGGATCGTTTTGACATATTTGGGGAGAATGTCAGGAAGCAACTAAATACAATTGTGTTCTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGTTTAATGTGGTTCATGCCATTCAACATCCTTATAACTTTTGTGATTGGCTCAGCACTTGGATGGTTGCTTGTCAAATTAACCAGAGCTCCTCAACATCTCAGGGGTCTTGTGTTGGGTTGTTGTGCTGCTGGAAACTTGGGCAACTTGCCTTTGATTATTGTCCCAGCAGTATGTAGAGAGAAAGGCAGTCCATTTGGAGCACCTGATGTTTGTCATACATATGGAATGGCCTACGCTTCACTTTCCATGGCGATTGGAGCTATTTACTTATGGTCTTATGTTTACAACATTGTGCGGGTTTCCTCCGTCGGGACAACAGAAGTTATCAACATAGAAGACGATTCCCCAGCCAAGATGAGGGAACCACTTCTTGACTCAAAAGATTGTTCCATCTCTGTAGACTATGCAGATCAACTGACGCTTCCTTACACTCAGTCTGAAGAAAACTTGAAGGTGACAACCGCAGATAAGGTGAAGCGATTCTTGAGGATGCTTTCAAGAGAGATCAATATTCAGGCATTGTTAGCACCTTCAACTACTGGAGCGATTCTTGGGTTTATCATTGGAATGGTTCCTCAGCTTCGGAAGTTACTGATTGGAAGTACTGCCCCTCTTCGCGTTCTACAAGATTCCACTTCTATGCTGGGGGATGCAGCCATTCCAGCTCTCACCCTGATCATGGGGGGAAACCTTCTTAAAGAGTATTCACGGGATGCCATGGTGGTGCTTTTCAATTTCAGTTTAAAGGGCTCAGGAATTCGGGCCTCACTCCTTATTGGAATCATAGTAGTCCGGTATATATTCCTGCCTCTGTTGGGCATTGCCATTGTTAAAGGCGCAGTCCAACTTGGTCTGGTGAACCCAGATCCCTTGTATCAGTTTGTCCTTCTATTACAATATGCACTTCCGCCAGCCATGAACATAGGCACAATCACGCAGCTGTTTGGAGCAGGCGAGAGCGAATGTTCTGTCATCATGCTGTGGACATATGCCTTGGCGTCAGTTGCCCTCACGCTTTGGTCCACCTTGTTCATGTGGCTTGTAGCTTGA 1380 0.4413 MQCLVKGETAGLIKDQLQSRKSIKRKVSDSPLFFFYSFNGRFQMGLLDLFFVASMPVIKVLLVTAVGSFIALDRFDIFGENVRKQLNTIVFFVXXXXXXXXXXXXGGGGGLMWFMPFNILITFVIGSALGWLLVKLTRAPQHLRGLVLGCCAAGNLGNLPLIIVPAVCREKGSPFGAPDVCHTYGMAYASLSMAIGAIYLWSYVYNIVRVSSVGTTEVINIEDDSPAKMREPLLDSKDCSISVDYADQLTLPYTQSEENLKVTTADKVKRFLRMLSREINIQALLAPSTTGAILGFIIGMVPQLRKLLIGSTAPLRVLQDSTSMLGDAAIPALTLIMGGNLLKEYSRDAMVVLFNFSLKGSGIRASLLIGIIVVRYIFLPLLGIAIVKGAVQLGLVNPDPLYQFVLLLQYALPPAMNIGTITQLFGAGESECSVIMLWTYALASVALTLWSTLFMWLVA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1567 459 PANTHER - 44 458 IPR045033 GO:0080162
Vvi4g1567 459 Pfam Membrane transport protein 53 450 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1567 Vvi-Chr4 23677511 23684742 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1567 K24139 - vvi:100260227 716.842