Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1565 ATGGGGTTCTGGAGTCTTTTTGTTACGGCACTTATGCCAATTCTGAAAGTACTGGTGGTTACTGGGATTGGCTTATTCATTGCCTTGGAGCGTATAGATCTCTTGGGGCCAACTGCTCGGCATCACTTGAACACTCTTGTGTTCTATATATTCTATCCTGCACTGGTAGCTAGCAACCTGGCCGATACAGTTACAGCTAGTAGTTTGGCTACAATGTGGTTCATGCCAGTGAATATACTTCTGACTTTTATCATTGGCTCAGCACTTGGTTGGATACTCATAAAAATCACCAGACCACCCCAACATCTACATGCACTTATACTTGGTTGTTGTTCGGCAGGAAATATGGGGAACTTGTTTTTCATTATCATCCCGGCAATCTGTGAGGAGTCAGACAATCCTTTTGGCTCATCTGATTGCTCCACAGATGGAGACGCGTACGCTTCCCTTTCTTCTGCGCTGGGTGCCATTGGTGTTTGGACTTATGTTTACATGATTATGCGGATGTCCGCAACTAAGTGCAAAGGAGAAATCAATCTATGTAACTCCACAACCAGTGTAAGAACTTCTCGAGAAGCATTGGAAATAAGCTCAGACTGTTGCACTGAAGCATTGCTTCCTCCAAGGGATAGCCCAAGGTCTGGGAACTGGTCAGATGAAGAAGAACTGCCTCATGACGGATCTGAGGAAAAATCAGAGGTGCCATTTTCAGAGAAGATTAAGCAGAAAGTTAAGATCTTTATGGAAAAGACGAACTTCAAGCAAGTGTTTACACCATCTACTATTGGAGTGATTTTTGGTTTCTTCATTGGGTTAATCCCTCCAATCCGAAAGCTAATTATTGGGGACAGTGCTCCTCTTCGTGTGATTGAGAGTTCTGCAACTTTGCTGGGGGAGGCAGCCATCCCATCTACAACCCTGATAATGGGAGCAAACCTCCTTTCTGGTTTAAAAGGGTCAGACGTTAGCATTGTTGTGATTTTAGGGATTATGGCAGTTCGGTATATTGCTTTGCCTCTGTTGGGTGTTGTTGTTGTTAAAGCTGCACATCATTTTGGCCTGGTGGGATCAAATTCATTATTCCAGTTTGTTCTTATGCTTCAATATGCACTTCCACCTGCCATGAGCACTGGTACAATGAGCCAGTTGTTTGAGTTTGGTCAAAGTGAATGTTCGGTTATCATGCTATGGACTTATGCGGTTGCAGCATTCAGTCTGACACTCTGGTCTAGCTTCTTCATGTGGCTTGTATCTTGA 1257 0.4383 MGFWSLFVTALMPILKVLVVTGIGLFIALERIDLLGPTARHHLNTLVFYIFYPALVASNLADTVTASSLATMWFMPVNILLTFIIGSALGWILIKITRPPQHLHALILGCCSAGNMGNLFFIIIPAICEESDNPFGSSDCSTDGDAYASLSSALGAIGVWTYVYMIMRMSATKCKGEINLCNSTTSVRTSREALEISSDCCTEALLPPRDSPRSGNWSDEEELPHDGSEEKSEVPFSEKIKQKVKIFMEKTNFKQVFTPSTIGVIFGFFIGLIPPIRKLIIGDSAPLRVIESSATLLGEAAIPSTTLIMGANLLSGLKGSDVSIVVILGIMAVRYIALPLLGVVVVKAAHHFGLVGSNSLFQFVLMLQYALPPAMSTGTMSQLFEFGQSECSVIMLWTYAVAAFSLTLWSSFFMWLVS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1565 418 PANTHER - 1 417 IPR045033 GO:0080162
Vvi4g1565 418 MobiDBLite consensus disorder prediction 205 236 - -
Vvi4g1565 418 MobiDBLite consensus disorder prediction 214 236 - -
Vvi4g1565 418 Pfam Membrane transport protein 10 409 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1565 Vvi-Chr4 23648110 23670069 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1565 K24139 - vvi:100253302 796.964