Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1555 ATGATGAAGTGTTGCCCAGACTTTCTGAGGAAAGCTCGCAAATTGGTAGGGTTTATAGCCACAACATCAGCGGCGGCAGCTTCACTCTCTTCCGCCACCTCTCCCAAGTTGTCTGCCGCATCCGCCATGGACGATCTCAAAACCCTCAACACCCGTCTCTGCATCATCGGCAGCGGTCCTGCAGCCCACACCGCCGCCATCTACGCCTCCCGGGCCCAGCTCCGTCCCATCCTCTTCGAAGGCTGGATGGCCAACGACATTGCTCCAGGCGGCCAGCTCACCACCACCTCCGACGTTGAGAACTTCCCCGGTTTCCCTGATGGTATTAATGGTAATGAAATCATGGATCGCTGCCGCGCCCAGTCCCTCCGCTTCGGCACTGAGATCTTCACTGAAACTGTCACCAGGGTCGATTTTTCCTCCACTCCCTTCAAAGTATTCACCGATTCCAAGACCGTCCTGGCCGATGCAGTCATCGTCGCCACCGGCGCCGTTGCCAAGCGCTTGCCCTTCCCCGGCTCCGGCGACGGCCCTGGTGGCTTCTGGAATAGGGGGATTTCCGCTTGTGCAGTCTGCGACGGTGCTGCCCCCATTTTTAGGGACAAGCCACTGGCCGTGATTGGCGGCGGAGACTCTGCCATGGAAGAAGCCACCTTCCTCACCAAGTACGGGAGCAAGGTCTATATCATTCACAGAAGGGACGCGTTCAGGGCGTCAAAGATCATGCAGCAAAGGGCTTTGTCCAACCCTAAGATTGAAGCCATCTGGAATTCGGTGGTGGTGGAAGGCCACGGAGATGAAAAGGGAAGACTTTTAGGAGGTGTAAAGGTTAAGAACGTGGTGAGCGGAGAGGTTTCTGATTTGAAGGTTTCGGGTCTCTTCTTTGCCATTGGCCACGAACCCGCCACCAAGTTCTTGGATGGGCAGCTGAAACTTGATTCGGATGGGTATGTAGTGACGGAGCCAGGGACTACTAAAACCAGCGTTCGTGGAGTTTTTGCTGCTGGAGACGTCCAAGACAAGAAGTACAGGCAGGCTGTGACTGCTGCTGGCACTGGGTGCATGGCAGCATTAGATGCAGAGCATTACCTGCAAGAGATTGGATCCCAGGAAGGTAAAAGTGATTGA 1128 0.555 MMKCCPDFLRKARKLVGFIATTSAAAASLSSATSPKLSAASAMDDLKTLNTRLCIIGSGPAAHTAAIYASRAQLRPILFEGWMANDIAPGGQLTTTSDVENFPGFPDGINGNEIMDRCRAQSLRFGTEIFTETVTRVDFSSTPFKVFTDSKTVLADAVIVATGAVAKRLPFPGSGDGPGGFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEATFLTKYGSKVYIIHRRDAFRASKIMQQRALSNPKIEAIWNSVVVEGHGDEKGRLLGGVKVKNVVSGEVSDLKVSGLFFAIGHEPATKFLDGQLKLDSDGYVVTEPGTTKTSVRGVFAAGDVQDKKYRQAVTAAGTGCMAALDAEHYLQEIGSQEGKSD* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 156 164 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 199 223 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 251 267 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 52 74 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 111 121 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 292 313 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 90 105 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 182 194 - -
Vvi4g1555 375 PRINTS Pyridine nucleotide disulphide reductase class-II signature 327 345 - -
Vvi4g1555 375 PRINTS FAD-dependent pyridine nucleotide reductase signature 155 173 - -
Vvi4g1555 375 PRINTS FAD-dependent pyridine nucleotide reductase signature 317 339 - -
Vvi4g1555 375 PRINTS FAD-dependent pyridine nucleotide reductase signature 290 306 - -
Vvi4g1555 375 PRINTS FAD-dependent pyridine nucleotide reductase signature 53 72 - -
Vvi4g1555 375 PRINTS FAD-dependent pyridine nucleotide reductase signature 203 221 - -
Vvi4g1555 375 NCBIfam thioredoxin-disulfide reductase 53 364 IPR005982 GO:0004791|GO:0005737|GO:0019430
Vvi4g1555 375 SUPERFAMILY FAD/NAD(P)-binding domain 48 364 IPR036188 -
Vvi4g1555 375 FunFam Thioredoxin reductase 175 302 - -
Vvi4g1555 375 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 353 IPR023753 GO:0016491
Vvi4g1555 375 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 189 211 IPR008255 GO:0016491
Vvi4g1555 375 Gene3D - 171 302 IPR036188 -
Vvi4g1555 375 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 51 366 - -
Vvi4g1555 375 Gene3D - 55 363 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1555 Vvi-Chr4 23601285 23604295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1555 K00384 - vvi:100263578 717.227