Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1551 ATGATCCAGCCCGTACAGTTGCTATCTCCAGAGGCTTCATCACATACAAATCAAACACGTAGATGTATGCAACCAAGCACAACATCTACAAATGCTTGCATCAACAGTAGACCTGTCTCACCTTTCGGGGAGACTGTTGTACCAAGTTGTTTTACTGCCAAGGAGTTTGCTGATAGATCAGATGCATATAAGACAGGAAGATGTTCAGCAAATAGTGTGGATAGATGTCCTCACAATAAGTTTACCCAGGACACTGGAGATTACAATACCTTAGATTTTGAAACTCAAGCATATACCAGATCTCAGCTCAATGCTGTTAAGCAAGATGGTCATTCAGAAAAAAATTATGTACGGGCAGATCCGAGTTACCTGAAAACACTTGGTCAGGCTCATTCTGGATGGATTTTTGGTGCCATAGCTGAGCTGGTTGATAATTCCAGGGATGCCAAAGCGACTAAATTGGGCATTTCTATTGAGATGATATATTCAAAGAAAGCTGGTGAAGATATCCCAATGCTGTCAGTTAAAGATGATGGGCAAGGAATGACCCATAAGGAGATTGTTAGAATGGTTTCTTTTGGGCACAAACAACCTGATACAGATGATCCAGATCATATTGGAAGATTTGGCATTGGATTTAAGAATCTGGAGATCCCAATTGTGAGCTACTACAGACAAGGGCAGTTTATGGAACTGGATGAAAGTATCCAGTCTGAAGCTTTTGCTAAGTATAACTTGAAAGCTATAAGGGAATTTTCACCATTTAATAAGTACTCCATTGGCATGAAAGCAGGGTTGTTTTGTGAAAAAGGTACGGGAACACAAATATACATATGGAATTTGGATAAATGGGGCTCAGATTATTGTCTGGAATGGCATAATGGGATGAGTAGTGGGAGCTCCTTCTACCAAGGCGACATATTCATTCGCTCCAGACGGGTCAAATCTCGTCCTGGCCAGATCAGTCAAAAGGTGCCTTTAGACTATTCACTTCGATCTTATTTGGAAGTCATCTTCTTAAATCCACGGATGAAGATTTTTATTCAGGGCTCACTGGTTAAAAGCCGACCATTGGCAAAATCTTTGAATAATACTGTCATAGAGAATGGTATTGTCATGGGAAAACCTGTTCAACTAACTCTTGGTCGCTGTCAATTAGAATGGGAGCAGGCAAATTGCGGAATATTTTTGTATTGGCATGGCCGCTTAATCGAAGGTTACAAGAGAGTTGGTGGCATGATACACAATGCAGATATGGGTCGGGGTGTAATTGGTGTTATAGATGTTACTGATATAATGAATGATGGAAATGGTCATGTTTGGGTGCATAGCAACAAGCAAGGATTTCAGGACTGTGAACCTTATGCTCGGCTTGAGGAGTGGCTAGGTAGCAAAGCTGATGAATTCTGGGACACAAATTTTGATACTCTTCAGTTGAAAAAGGGAAATAATCTCTACAAACCTGACCACGAATGGGTACAATGTGACAAGTGTAGGAAGTGGCGGGTGCTAAGCTCTGGTTTTAGGGCTAATGACTTGCCTCAAGAGTGGTTTTGTTACATGGAGCCTTTCAATGGACTGTGTGAAATTCCTGAACAAAAGGTTGCACGAGGAGTGATTACAGTGTCTGCAAAACGATCTGGTTGTGATCCCTCACAGAAGCCTGTTCAGTGTGACAATGTGCAAATCTTACATTCCACCAGCTCACTGGAAATTGAATTGTTGAGTGGAATAACAACTGTAATACCAACTTGTTTCTTTTCACTGAAAGAATGA 1776 0.411 MIQPVQLLSPEASSHTNQTRRCMQPSTTSTNACINSRPVSPFGETVVPSCFTAKEFADRSDAYKTGRCSANSVDRCPHNKFTQDTGDYNTLDFETQAYTRSQLNAVKQDGHSEKNYVRADPSYLKTLGQAHSGWIFGAIAELVDNSRDAKATKLGISIEMIYSKKAGEDIPMLSVKDDGQGMTHKEIVRMVSFGHKQPDTDDPDHIGRFGIGFKNLEIPIVSYYRQGQFMELDESIQSEAFAKYNLKAIREFSPFNKYSIGMKAGLFCEKGTGTQIYIWNLDKWGSDYCLEWHNGMSSGSSFYQGDIFIRSRRVKSRPGQISQKVPLDYSLRSYLEVIFLNPRMKIFIQGSLVKSRPLAKSLNNTVIENGIVMGKPVQLTLGRCQLEWEQANCGIFLYWHGRLIEGYKRVGGMIHNADMGRGVIGVIDVTDIMNDGNGHVWVHSNKQGFQDCEPYARLEEWLGSKADEFWDTNFDTLQLKKGNNLYKPDHEWVQCDKCRKWRVLSSGFRANDLPQEWFCYMEPFNGLCEIPEQKVARGVITVSAKRSGCDPSQKPVQCDNVQILHSTSSLEIELLSGITTVIPTCFFSLKE* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1551 591 Pfam CW-type Zinc Finger 491 533 IPR011124 GO:0008270
Vvi4g1551 591 Pfam Morc6 ribosomal protein S5 domain 2-like 329 470 IPR041006 -
Vvi4g1551 591 ProSiteProfiles Zinc finger CW-type profile. 486 536 IPR011124 GO:0008270
Vvi4g1551 591 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 137 214 - -
Vvi4g1551 591 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 126 288 IPR036890 -
Vvi4g1551 591 Gene3D - 105 278 IPR036890 -
Vvi4g1551 591 Gene3D - 479 537 - -
Vvi4g1551 591 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 215 541 IPR045261 GO:0016887
Vvi4g1551 591 MobiDBLite consensus disorder prediction 1 30 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1551 - - vvi:100253299 1173.3