Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1549 ATGGCCCTAGCGATGAGTATTCACCTCACGCGCCTCCCCCGCCACTTCCCTTTCCCTTCACTCTTTCCTCGCTTTCCTCGAATTCTTAGCAACCCTTGTCATCTCACTTCTCGCCGAAAACCACGTCGAACCTTCACTTTCTTCACCTGCAACTTCACCGTCGCCGCCACTTCCGCCACTTATGGCAGGAATGATAATGTTGGGGCAGATAATGAAAGATATGATGTTATTGTGGTTGGAGGAGGCCATGCAGGCTGTGAAGCTGCCCTTGCATCTGCTCGTTTAGGGGCAAAAACTCTTCTTCTTACTCTAAATATTGATAGAATTGCATGGCAGCCTTGTAATCCTGCTGTAGGTGGACCTGCAAAGTCACAATTGGTACATGAAGTGGATGCACTCGGTGGTGAAATTGGAAAAGTTGCTGATAGGTGTTATTTACAAAAACGTGTTCTAAACATATCAAGAGGTCCTGCTGTTCGGGCATTGCGTGCACAGACTGATAAGAGGGACTATGCTTTGCAAATGAAAAACATTGTGGAGAGGCAAGCTTACTGTCCAAACCTTTCTATTAGAGAGGCGATGGTGACTGATATCCTACTAGGAAAGAATGACAATGTAGAAGGTGTTCGAACATTCTTTGGGATGGACTTCTATGCTCCTTCTGTTATTCTAACAACTGGCACTTTTATGAGCGGTAAAATTTGGGTTGGTAGAACTTCTATGCCTGCAGGGAGAGCTGGTGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCGCCTTGGATTTGAAACTGACCGGTTAAAAACTGGAACCCCTGCACGTGTGGACTGTCGTACTGTAGATTTCTCTGGATTGGAACCCCAGCATGGAGATGAAGAGGTGAGCTGGTTTAGCTTTGATCCTGATTTCCATATTGAGAGGGAACAAATGTGCTGCTATCTGACACGTACTACAAAGAGCACTCACCAGCTAATTAAAGAAAATTTGCACGAAACTCCCACTTATGGGGGGTGGGTTGAAGCCAAGGGACCCAGATATTGCCCCTCCATTGAAGATAAGATTGTGAGATTTCAAGATAAAGAGTCTCATCAGATTTTTCTTGAACCAGAAGGTCGAAATGTGCCTGAGCTCTATGTGCAGGGGTTCTCAACTGGTTTACCTGAGAGACTGCAGTTACCACTCTTGAGGACATTACCTGGACTTGAAAACTGTTCAATGCTAAGGCCTGCTTATGCTGTAGAGTATGATTTCTTGCCTGCTTATCAGTGCTCGAGGTCTCTTATGACAAAGCAGATTGAAGGTCTTTTTTTCTCTGGACAGATCAATGGAACGACAGGCTATGAAGAAGCTGCAGCACAGGGTTTAATTTCTGGAATTAATGCTGCCAGATATTCAGATGGTAAATCCCTCATTGTTCTTGAGAGGGAAAGCAGTTACATAGGGACTTTGATAGATGATCTGGTTACCAAAGACCTTCGAGAGCCTTATCGAATGTTAACAAGCCGCTCAGAACATCGATTACTTCTTCGATCTGATAATGCGGATAGTCGTCTCACACCTTTGGGGCGTGAAATTGGTTTGATAGATGATAGACGTTGGAAAATATACCAGGACAAGCAAGCTCAAATTTCACAAGAAAAAAAGCGATTAAGAACTGTCCGGATTTCAGGGGGAGATTTGGCTTCTGATGTTACTCATTTGTCTGGTCAGCCAGTGAAGGACTCCTCAACTCTGGAGAGTATTCTTAAGAAACCGCATGTACAATATAAAGTTCTGGATAAGCATGGTTTTGGAAATGAACTTCTGTCCAAAATAGAGAAAGAATGTGTGGAGATTGATATCAAGTATGAGGGCTTTATTATGCGGCAGCAGAGCCAGCTCCAACAGATGGCTCGTCAGCAACACAGACCACTACCAGAGGACTTGGATTACTATGCAATGACAACTTTGTCTCTTGAGGCTCGTGAGAAACTATCCAAGATCCGGCCACAGACCATTGGTCAAGCAAGTAGAGTGGGTGGAGTGAGCCCTGCTGACATTACTGCTCTTCTCATCATCCTTGAAACCAACAGAAGAAAAGCCCAGGAACAAAGAAGGTGCCAGTTGCTGACTTCCGTCATGGTAGATCAGGACAAATGTATTACTGCTCCTCTTCCTGAGACACTCAATCCCCAGAAAATCTGCTAG 2190 0.4475 MALAMSIHLTRLPRHFPFPSLFPRFPRILSNPCHLTSRRKPRRTFTFFTCNFTVAATSATYGRNDNVGADNERYDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADRCYLQKRVLNISRGPAVRALRAQTDKRDYALQMKNIVERQAYCPNLSIREAMVTDILLGKNDNVEGVRTFFGMDFYAPSVILTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPARVDCRTVDFSGLEPQHGDEEVSWFSFDPDFHIEREQMCCYLTRTTKSTHQLIKENLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKESHQIFLEPEGRNVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDFLPAYQCSRSLMTKQIEGLFFSGQINGTTGYEEAAAQGLISGINAARYSDGKSLIVLERESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGREIGLIDDRRWKIYQDKQAQISQEKKRLRTVRISGGDLASDVTHLSGQPVKDSSTLESILKKPHVQYKVLDKHGFGNELLSKIEKECVEIDIKYEGFIMRQQSQLQQMARQQHRPLPEDLDYYAMTTLSLEAREKLSKIRPQTIGQASRVGGVSPADITALLIILETNRRKAQEQRRCQLLTSVMVDQDKCITAPLPETLNPQKIC* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1549 729 ProSitePatterns Glucose inhibited division protein A family signature 1. 344 358 IPR020595 -
Vvi4g1549 729 Gene3D - 530 619 - -
Vvi4g1549 729 Pfam Glucose inhibited division protein A 75 469 IPR040131 -
Vvi4g1549 729 Gene3D - 639 689 IPR044920 -
Vvi4g1549 729 FunFam tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 67 295 - -
Vvi4g1549 729 PRINTS Pyridine nucleotide disulphide reductase class-I signature 75 97 - -
Vvi4g1549 729 PRINTS Pyridine nucleotide disulphide reductase class-I signature 222 231 - -
Vvi4g1549 729 SMART GIDA_assoc_3_2 615 686 IPR047001 -
Vvi4g1549 729 SUPERFAMILY FAD/NAD(P)-binding domain 73 331 IPR036188 -
Vvi4g1549 729 FunFam tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 530 619 - -
Vvi4g1549 729 FunFam tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 384 529 - -
Vvi4g1549 729 FunFam tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 638 691 - -
Vvi4g1549 729 Pfam tRNA modifying enzyme MnmG/GidA C-terminal domain 473 685 IPR026904 -
Vvi4g1549 729 Hamap tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 72 693 IPR004416 GO:0002098
Vvi4g1549 729 Gene3D - 385 529 IPR036188 -
Vvi4g1549 729 Gene3D - 67 297 IPR036188 -
Vvi4g1549 729 PANTHER GLUCOSE INHIBITED DIVISION PROTEIN A 72 698 IPR002218 GO:0008033|GO:0050660
Vvi4g1549 729 NCBIfam tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 74 691 IPR004416 GO:0002098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1549 K03495 - vvi:100243047 1389.4