Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1537 ATGGATGTTAGAAGCAGCATGAAAGTTGTACTGCTGCCATGGTTGGCTCATGGTCACATTTCTCCATTCCTAGAGCTGGCTAAGAAGCTTTCAAGGAGGAACTTCTACATATATTTTTGTTCTACTCCTGTTAATCTCAGTTCCATCAAAGGTAAACTCACTGAGGAAGACTCTCTTTCAATAGAACTAGTAGAAATCCATCTTCCATCTCTTCCTGACCTTCCTCCACACTACCAAACAACCAATGGGCTCCCTCCCCATCTCATGCCCACCCTCAAAAAGGCCTTTGATATGGCAAGCCCTGGCTTTGCCGACATCCTAACAACTCTGAACCCGGATTTGATTATATATGATATCCTCCAGCCATGGGCACCAGTTGCAGCTTCTTCCCAAAATATTCCTGCTGTTCTGTTCCTAAGCACAGGAGCCACCCTTTTGTCTGTTCTCCTTCAGGAGCAACCTATTACAGGGATCCCTCTTCAGGATTCCGAGAGGATTAAAATGCTCAACCATTTGGCTGACTCTTCTGCAAACGAGATCACCGATGAGGCACGGGCTGCTCAATGCTTGAAACTGTCCTCCAACATCATCTTGATGAGGACTTTCAGGGATCTTGAGGGGAAGCATATAGATCAGGCCTCTTGTCTAACTCAGAAGAAGGTGGTGCCTGTCGGTCCACTTGTTCAACACACCACCGACGAATTTGAGAAAGAGGAAATCATTGAGTGGCTTGACAAGAAGGAAGAATCCTCAACAGTACTGGTCTCCTTTGGCAGTGAATATTTTCTGTCTAAAGAGGAGATGGAAGAGATGGCTCATGCGCTGGAGCTGAGTACGGTTAGCTTCATCTGGGTGCTGAGGTTTCCTCAGAGAGACAAAATTGCTAGTGTGGAAGAGGCACTGCCAGAGGGGTTTCTTAGCAGAGTGGGAGAGAGAGGAAAGGTTGTGAAAGATTGGGCTCCACAGAGAGAAATACTAAATCATTCTAGCACTGGTGGGTTTGTGAGCCATTGTGGATGGAGTTCTGTAATGGAGAGCCTGAAGTTTGGAGTTCCAATTGTGGCCATTCCAATGCATCTTGATCAGCCATTAAATGCTAAAGTGGTGGAGAGTGTTGGCGTGGGTGTGGAGGTCAAGAGAGATGAGAATGGGAGGCTTGACAGAGAAGAGATAGCAAAGGTGATCAAGCAGGTGGTTGTTGAAAAATCTGGGGAAAATGTAAGCAGAAAGGTAAGAGAAATGAGTGAAAGCATGAGAAAGCAGGCAGAAGAAGAGATAGCTGAGGTGGTGGAGGAGCTGGTGCAACTGTGTAAAGGAGATGGGGCGGTCAGTTCAAAGTCTCCAACTCCCTAA 1353 0.4656 MDVRSSMKVVLLPWLAHGHISPFLELAKKLSRRNFYIYFCSTPVNLSSIKGKLTEEDSLSIELVEIHLPSLPDLPPHYQTTNGLPPHLMPTLKKAFDMASPGFADILTTLNPDLIIYDILQPWAPVAASSQNIPAVLFLSTGATLLSVLLQEQPITGIPLQDSERIKMLNHLADSSANEITDEARAAQCLKLSSNIILMRTFRDLEGKHIDQASCLTQKKVVPVGPLVQHTTDEFEKEEIIEWLDKKEESSTVLVSFGSEYFLSKEEMEEMAHALELSTVSFIWVLRFPQRDKIASVEEALPEGFLSRVGERGKVVKDWAPQREILNHSSTGGFVSHCGWSSVMESLKFGVPIVAIPMHLDQPLNAKVVESVGVGVEVKRDENGRLDREEIAKVIKQVVVEKSGENVSRKVREMSESMRKQAEEEIAEVVEELVQLCKGDGAVSSKSPTP* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1537 450 FunFam Glycosyltransferase 238 421 - -
Vvi4g1537 450 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 238 407 IPR002213 GO:0008194
Vvi4g1537 450 Coils Coil 412 439 - -
Vvi4g1537 450 CDD GT1_Gtf-like 7 416 IPR002213 GO:0008194
Vvi4g1537 450 PANTHER GLYCOSYLTRANSFERASE 8 433 - -
Vvi4g1537 450 FunFam Glycosyltransferase 9 234 - -
Vvi4g1537 450 Gene3D Glycogen Phosphorylase B; 243 422 - -
Vvi4g1537 450 Gene3D Glycogen Phosphorylase B; 1 242 - -
Vvi4g1537 450 ProSitePatterns UDP-glycosyltransferases signature. 319 362 IPR035595 -
Vvi4g1537 450 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1537 Vvi-Chr4 23134466 23135818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1537 4 405 Glycosyltransferase AT5G65550 33.641 1.55e-73 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1537 - - vvi:100260222 870.152