Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1531 ATGATTGTGTCAATGTGCAACCTATCTTCATCATTGGGATCTTTAAATTCATTCAGACTTAAAGTGCAAAAGGCGCTGTTGCAATCAGATGTCCAATCTAAATCAGATAAAAGCCCTGTCACAGTGGCTGACTATGGCTCACAGGCTGTAGTTAGTTTTATACTGCAGAGAGAACTTCCATCTGAATCTTTCTCATTAGTGGCTGAGGAGGATTCGGGAGATCTTCGCAAGGATGGTGCCCAAGAAACACTAGCACGCATTACTGAACTTGTGAATGATACTCTTACCAGTGATGGGACATGTATATCTCGTGTATCTGAGGAAGATGTTCTTACTGCCATTGACTCTGGTAAATCTGAAGGCGGTTCTAATGGCCAACACTGGGTTTTGGATCCTATTGATGGCACCAAAGGTTTTCTAAGAGGAGACCAGTATGCAATAGCATTAGCACTGCTAGATGAAGGAAAAGTGGTGTTGGGTGTCCTCGCTTGTCCAAATCTTCCCTTGGCATCCATTGGTGGTCAAGATCAGCATTCTTTACACAACCAAATTGGCTGCCTTTTCTCTGCTAAAATTGGCGAAGGAACTGACATGCAGCCATTAGATGGTTCTTCACCAATAAAGGTGCATGTCAGCGCCATTGAAAACCCCGAGGAAGCATCATTCTTTGAATCATTTGAAGCAGCACACTCAAAGCATGACTTGTCTAGCTCCATAGCAAAGAAACTTGGAGTCAAAGCACCCCCAGTTAGAATTGATAGCCAGGCGAAGTATGGGGCTCTATCCAGAGGAGATGGGGCCATTTATCTTCGCTTCCCTCATAAAGGATATCGTGAAAAAATATGGGATCATGCTGCTGGATGCATTGTTGTGACAGAAGCTGGGGGTGAGGTGTCAGATGCGGCTGGGAACCCATTAGATTTTTCTAAGGGAAGATATCTTGATCTGGAGACAGGCATCATTGTCACGAATAAGAAGTTGATGCCATCGCTATTGAAGGCAGTTCGAGAGTGTCTTGATGAGAAACCTTCCTCATTGTAA 1041 0.4409 MIVSMCNLSSSLGSLNSFRLKVQKALLQSDVQSKSDKSPVTVADYGSQAVVSFILQRELPSESFSLVAEEDSGDLRKDGAQETLARITELVNDTLTSDGTCISRVSEEDVLTAIDSGKSEGGSNGQHWVLDPIDGTKGFLRGDQYAIALALLDEGKVVLGVLACPNLPLASIGGQDQHSLHNQIGCLFSAKIGEGTDMQPLDGSSPIKVHVSAIENPEEASFFESFEAAHSKHDLSSSIAKKLGVKAPPVRIDSQAKYGALSRGDGAIYLRFPHKGYREKIWDHAAGCIVVTEAGGEVSDAAGNPLDFSKGRYLDLETGIIVTNKKLMPSLLKAVRECLDEKPSSL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1531 346 ProSitePatterns Inositol monophosphatase family signature 1. 128 141 IPR020583 -
Vvi4g1531 346 SUPERFAMILY Carbohydrate phosphatase 28 340 - -
Vvi4g1531 346 Gene3D - 210 345 - -
Vvi4g1531 346 FunFam SAL1 phosphatase 11 209 - -
Vvi4g1531 346 CDD PAP_phosphatase 20 337 - -
Vvi4g1531 346 PANTHER PHOSPHATASE 20 341 - -
Vvi4g1531 346 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 20 342 IPR006239 GO:0006790|GO:0008441
Vvi4g1531 346 Pfam Inositol monophosphatase family 36 338 IPR000760 -
Vvi4g1531 346 ProSitePatterns Inositol monophosphatase family signature 2. 282 296 IPR020550 GO:0046854
Vvi4g1531 346 Gene3D - 14 209 - -
Vvi4g1531 346 FunFam PAP-specific phosphatase HAL2-like 210 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1531 Vvi-Chr4 23005516 23039379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1531 K15422 - vvi:100244767 630.557