Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1528 ATGGGTGCCTGTAAGGTTCCACCCATATCCTGTTTCCTCCTGCCCACACCCCCAAACTGCAAAACCCCAATCCCAATCCGTCAAAAATTAAACCCCAGTTCTCCAAACAGACGGGGTTTGTTGATTTCCACATCCAGTCTTCTTGTTGTTCTTCTTCCCCCTCCCACTTCCTCCTCTGCTCTTCCCACCTTCGACCCCGTCTCTCCAAATGAAAGAGACGCAAGCGCTGACGTCTCTCAGAGAGTCTCCGAGGCCGTCAGTTTGTTGGAGAAAGGTAGAGAGTTGCAAGCTCAGGGCGACTTCGAACGGGCTCTTCAGTACTTCACTCAGGTAGTTAACAACTATAAAGACTTTGCTTTCTCAGACTATGCAAGAGTAGGGAGGGCATTGGCCTTATATGAGGTTGGTGACAGACAAGAAGCTATAGCAGAGATGGAAGATGTTTCCATATCTCTAAAGGGATATCCAGAAGTGCATGCAGCTCTAGCAGCAGCTTTATATGCAGACAAGCATGCTCCGCTCCTTGCTGAAAACCAGTTCACAATTGCTACTCTACTTGATCCTCACTATACAGACATTGCCTATGTAAGAGAAACAAAGCATTGGCCTCCAAGCTTAATTAGCTCATTGCAACACTTCATCACACTCTCATAG 654 0.4725 MGACKVPPISCFLLPTPPNCKTPIPIRQKLNPSSPNRRGLLISTSSLLVVLLPPPTSSSALPTFDPVSPNERDASADVSQRVSEAVSLLEKGRELQAQGDFERALQYFTQVVNNYKDFAFSDYARVGRALALYEVGDRQEAIAEMEDVSISLKGYPEVHAALAAALYADKHAPLLAENQFTIATLLDPHYTDIAYVRETKHWPPSLISSLQHFITLS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1528 217 Gene3D Tetratricopeptide repeat domain 32 204 IPR011990 GO:0005515
Vvi4g1528 217 Pfam Tetratricopeptide repeat 90 144 - -
Vvi4g1528 217 SUPERFAMILY TPR-like 81 195 IPR011990 GO:0005515
Vvi4g1528 217 PANTHER EXPRESSED PROTEIN 1 217 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1528 - - vvi:100260231 402.905