Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1524 ATGGATATAATTGAATCCATCCTTGACATTCCAGTGCAAGATCCAAAAGAGGAAGAGTTCTCTTCTGCTGATTTGAATTGGACCAAGTTTGGAAATCCCGAGCACCATGATGATGTAGCTCTTATTCCTTATGCACGAGTTGATGCATTTATAATTGGAGAATGCTCTAATGTTGAATGTCCAACACGGTTTCATATTGAGAGGGGAAGAAAACGATCTAAAGGCAGCTTAAAGGAGTACAAAAATGATGAATATTTGGAATATAGGCTGTATTGGTGTTCATTTGGTCCTGAGAACTATGGGGAAGGTGGGGGTATATTGCCAAGCCGGAGATATAGACTTAACACCAGAAATCGTGCTGCTAGACCTCAATCTATGCGGGGCTGTACATGCCATTTTGTAGTGAAACGCCTGTATGCCCGTCCCTCACTTGCACTTATTATATATAATGATAGGCGTCATGTGAACAAGTCTGGTTTTGTCTGCCATGGCCCCCTAGACAGAGATGCAATTGGCCCTGGTGCCAAGAAAATTCCATACATTTGTAGTGAAATTCAGCAGCAAACAATGTCTATGATCTATCTTGGCATTCCTGAGGAAAACGTGTTAGAGAAACACATTGAGGGGATTCAACGTTACTGTGGTTCAAATGCCAAAGTTAATAGCCTTGCTTCCCAATATGTTCACAAACTTGGTATGATTATCAAACGCTCTACCCACGAATTGGATCTAGATGACCAAGCTAGCATTCGAATGTGGGTTGAACGCAATAAGAAATCCATATTCTTTTATCAGGATTCTTCAGAAGCAGATCCTTTCATTTTGGGCATTCAAACAGAATGGCAGTTGCAACAAATGATTCGATTTGGCCATCGCAGTATTATGGCAGTTGATTCCACATTTGGAATAAAGAGGCTCAAGTACCCTTTGTGCACGCTTCTTGTGTTTGATTCAAGACAGCATGCACTCCCTGTTGCATGGATTATTACCCGTAGTTTTGCTAAGCCAGATGTGTCTAAATGGATGAAAGCTCTTCTTGATCGAGCTCGTGGTATTGACATTGGGTGGAAGGTCAGTGGGTTTTTGATTGATGATGCAGCAGCAGAGATTGATTCTATAAGGGATGTATTTTGCTGCCCTGTGCTATTTTCCCTCTGGCGTGTCCGTAGATCATGGCTAAGGAATATCATCAAGAAAAGCAGCAATGTTGAAGTTCAGAGGGAGATGTTTAAACGGCTGGGAAAAATTGTCTACAGCATTTGGAGTGGAGTGGATTCTCTGGTTGCCTTGGAAGAATTCACCCAGGATTTTGTTGATCAAACTTCCTTCATAGAGTACTTCAAGGCATTGTGGATGCCTAAGATAGAAATGTGGATTGATATGATGAAAACACTTCCACTTGCAAGCCAGGAGGCATCAGGTGCCATAGAAGCATATCATGTGAAGCTGAAAGTTAAACTATATGATGATTCACATCTTGGTGCACTCCAGAGGGTTGATTGGTTAGTGCATAAGCTAACAACTGAGCTGCACTCAAGCTACTGGCTTGATCGCTATGCAGATGAAAGTGATTCCTTTCAGAATGTTAAGGAAGAATATATTGCTTCTACATCTTGGCACCGAGCACTGCGAATTCCTGACACTTCCGTTATCTTGGAGGATAAGAACCAACTTTTTGCCAAGGTTTTAAGTCAAAAGGATAGCAATCTAACACATCTAGTGTGGAATCCTGGATCAGAATTTGCTTTTTGTGACTGTGAATGGGCAATGCAGGGTAATCTTTGCAAGCATATCATCAAGGTCAATATGATCTGCAAAAATCATCAAGCCTATCAGTCTTCCATGTCATTTCAGTCATTCAGAGAGATCTTAATGAATCTGTGGAGAAAACCAATGGATGATTCAGTTGCATTGGATCAGGCGGTGGCCTGGACACACCAGATGCTTGATCAAATTCAAAAGCTTGTTGAACTGAACAGTGCCAATGACATTGGCAGTGTGGTAAATAATCTGCCTTTGAAATGGGTTTCCAAGAAAGGTAGAACATTTGTTGGCAGACCATCATCCGCCCCATCACTTCCCTCTAGTTCCAAGAGTAAACCCCTGGATGCTGCTGCACGCAAAAAGAATCGGAAGCGGAAAAGATTGTCACGGTTGAGATAG 2163 0.4193 MDIIESILDIPVQDPKEEEFSSADLNWTKFGNPEHHDDVALIPYARVDAFIIGECSNVECPTRFHIERGRKRSKGSLKEYKNDEYLEYRLYWCSFGPENYGEGGGILPSRRYRLNTRNRAARPQSMRGCTCHFVVKRLYARPSLALIIYNDRRHVNKSGFVCHGPLDRDAIGPGAKKIPYICSEIQQQTMSMIYLGIPEENVLEKHIEGIQRYCGSNAKVNSLASQYVHKLGMIIKRSTHELDLDDQASIRMWVERNKKSIFFYQDSSEADPFILGIQTEWQLQQMIRFGHRSIMAVDSTFGIKRLKYPLCTLLVFDSRQHALPVAWIITRSFAKPDVSKWMKALLDRARGIDIGWKVSGFLIDDAAAEIDSIRDVFCCPVLFSLWRVRRSWLRNIIKKSSNVEVQREMFKRLGKIVYSIWSGVDSLVALEEFTQDFVDQTSFIEYFKALWMPKIEMWIDMMKTLPLASQEASGAIEAYHVKLKVKLYDDSHLGALQRVDWLVHKLTTELHSSYWLDRYADESDSFQNVKEEYIASTSWHRALRIPDTSVILEDKNQLFAKVLSQKDSNLTHLVWNPGSEFAFCDCEWAMQGNLCKHIIKVNMICKNHQAYQSSMSFQSFREILMNLWRKPMDDSVALDQAVAWTHQMLDQIQKLVELNSANDIGSVVNNLPLKWVSKKGRTFVGRPSSAPSLPSSSKSKPLDAAARKKNRKRKRLSRLR* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1524 720 Coils Coil 702 720 - -
Vvi4g1524 720 MobiDBLite consensus disorder prediction 684 720 - -
Vvi4g1524 720 ProSiteProfiles Zinc finger SWIM-type profile. 569 606 IPR007527 GO:0008270
Vvi4g1524 720 MobiDBLite consensus disorder prediction 705 720 - -
Vvi4g1524 720 PANTHER ZINC ION BINDING PROTEIN 1 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1524 Vvi-Chr4 22936894 22945029 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1524 - - vvi:100247174 1417.14