Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1519 ATGGAAGATACAAGAACAGTTATTCGAAGTGGGGAAAGAAGCCACAATCTTCATGAAACAAATGGGGTGCTAGATCAGGTCTCTAGTCCATTGAGAAGAGAAGTGCTTAACAGGTCAGTATTTTCAATGAAGCCTCTGGGAAGTGAAGAAACAGACTTGGAAGATGGGAAGTTGGAAAAGGATAGAGAGAAATCAGTACGAAGTAACAGGGTAGTTAGAATACACAATCAGGCTTTATTGTCTGGCTTTGCATATTGCATCTCATCCTGCAGTATGATTCTGGTTAACAAGTTTGTCCTTTCCAGCTATGATTTTAATGCCGGGATATCTTTGATGATCTACCAGAATCTCGTCTCAGTGATTGTTGTTACTGTATTGAGTTTTTTCGGCCTAATAACAACAGAACCGCTTACATGGAAGTTGATTAAGGTCTGGTTGCCTGTGAATGTTATATTTGTTGGGATGCTTGTTACAAGCATGTTTAGCCTGAAGTACATTAATGTCGCTATGGTCACAGTTTTGAAGAATGTTACTAATGTGATAACTGCTGTTGGTGAAATGTATCTTTTCAATAAGCATCATGACAACAGAGTCTGGGCTGCTCTCTTCTTAATGATCATTTCAGCAATTTCTGGAGGAATTACTGATCTATCTTTTAATGGTATTGGCTATACATGGCAAATTATTAATTGTTTCTTGACCGCATCATATTCTTTGACCCTACGTAGGGTCATGGACACAGCCAAGCAAGTAACAAAATCTGGAAACTTGAATGAGTTTTCAATGGTCTTGCTAAATAACACACTTTCATTGCCTCTTGGGGTTATCCTTATGTTTGTGTTCAATGAGGTGGATTATCTTTCTACAACGCCACTTTTGAGGCTGCCTACCTTCTGGTTGGTGATGACACTGAGCGGATTTTTGGGTCTAGCAATCAGCTTCTCTTCTATGTGGTTTCTTCATCAAACAGGGGCTACCACATACAGCCTTGTGGGGTCATTAAATAAGATTCCTCTATCCGTTGCTGGCATTGTTCTATTCCATGTCCCTACTAGTTTGGAGAACTCTGCAAGCATCTTCTTTGGTCTAGTAGCGGGAGTATTTTTTGCCAAAGCCAAAATGAGGGAGAGATCTCAATCCTGA 1143 0.3998 MEDTRTVIRSGERSHNLHETNGVLDQVSSPLRREVLNRSVFSMKPLGSEETDLEDGKLEKDREKSVRSNRVVRIHNQALLSGFAYCISSCSMILVNKFVLSSYDFNAGISLMIYQNLVSVIVVTVLSFFGLITTEPLTWKLIKVWLPVNVIFVGMLVTSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKHHDNRVWAALFLMIISAISGGITDLSFNGIGYTWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNTLSLPLGVILMFVFNEVDYLSTTPLLRLPTFWLVMTLSGFLGLAISFSSMWFLHQTGATTYSLVGSLNKIPLSVAGIVLFHVPTSLENSASIFFGLVAGVFFAKAKMRERSQS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1519 380 PANTHER SOLUTE CARRIER FAMILY 35 79 373 - -
Vvi4g1519 380 Pfam Triose-phosphate Transporter family 82 368 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1519 Vvi-Chr4 22871191 22884650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1519 43 328 Organic Solute Cotransporters AT2G13650 79.443 2.77e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1519 K15356 - vvi:100259141 741.11