Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1517 ATGGCTTTCTCTTCAACTTTCTCGCACAACTCCTTGTCATGCTTCTCATCTTCATTCCCACAAACCCCAAGACCAAGCCCTTTTCGTTTCACTTCGATCAGGGCAGTCAAATCCGCGGAACCCGACAAGGAGAAGCTTGCAAAATCCAACACCCAGCAAGACTCCTCCAATGCCCAGCCTCCCACCACTGCTCCCAAGTATCCCAAGAAACCTGTCTATTCCATGAAGAAAGGCCAAATAGTGAGGGTGGACAAGGAGAAGTATCTTAATAGTATCAATTATTTGTCCGTTGGGCATCCGCCTTATTACAAGGGCTTGGACTACATCTATGAAGACCGGGGTGAGGTCTTGGATTTACGTATTTTTGAGACAGGAGAGTATGCCCTTATTGCATGGGTTGGGATTCCAACTGCTCCTGCTTGGCTGCCAACAGATATGCTTATCAAGTCAGATAAGCTCAATTATGAGAGAATGTAA 477 0.4633 MAFSSTFSHNSLSCFSSSFPQTPRPSPFRFTSIRAVKSAEPDKEKLAKSNTQQDSSNAQPPTTAPKYPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSDKLNYERM* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1517 158 Pfam Cyanobacterial and plant NDH-1 subunit O 75 149 IPR020905 GO:0005886|GO:0016655
Vvi4g1517 158 MobiDBLite consensus disorder prediction 37 70 - -
Vvi4g1517 158 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 158 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1517 - - vvi:100248924 299.671