Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1516 ATGCCAATAGAGATGCCCAGAGGCCTACCATTCTCAGTGGACACATGGACTCCATCTTCAAAGAAAAAGAGGCACCATTTTCTCACTCATGCCCACAAAGACCACTCCTCTGGCATCTCCACCCACTCTGCATATCCAATTTACTCTACCCACCTCACCAAAACCCTAATTCTTCAACAATATCCCCAGCTTGATGATTCATTGTTTGTGGGTATCGAGGTGGGACAGTCGATGGTTGTTGACGACCCGGATGGCAGATTTGGGGTCACGGCTTTTGATGCCAATCACTGCCCTGGAGCTGTAATGTTCTTGTTTGAAGGCGATTTCGGTAACATCCTGCACACAGGAGATTGCAGACTCATCCCTGAGTGTTTGCAAAACTTACCACAGAAGTATGTAACCAAGAAAGGAAAAGAGCCAAAGTGTCAGTTTGATTATGTTTTCCTAGACTGCACGTTTGGGAGATCTTCTCTGCATATCCCCAGCAAGCATTTGGCTATCCAACAGGTTATCAATTGTATATGGAAGCACCCTGATGCCCCTATCGTGTATCTGTGCAGCGATATGCTAGGTCAGGAAGAGATTCTTATCAATGTGTCCAGAATATTTGGGTCCAAGATATTTGTTGATAAAGCCAACAATCCTGAATGTTTCCAAGCTTTGACACATATGGTTCCTGAAATTCTCTCTCAAGATCCATCTTCCCGCTTCCAAGTATTTGAAGGATTTCCTAAGCTTTGTGAAAGAGCACAAGCAAAGCTTGCAGAGGCTCAAGCTAATTCCCTACCTGAGCCTCTCATTATCCGCCCTTCAGCACAATGGTATGCATGTGAGGAAGACTTACCAAAGACTGAAAGGCGAAAAAAGGAGAGCTTTAATGAAGCTGTAAGAGACCAGTTTGGCATTTGGCATGTCTGTTACTCAATTCATTCATCTAGGCAAGAATTAGAGTGGGCTCTGCAGCTTCTTGCACCCAAACGGGTTGTATCAACTACTCCCAGTTGCCGAGCTATGGAGCTGAATTATGTGAAAAAACATTGCTTTAGCAGTCACATAACTTCCAGTGACCCTCTCTGGAAACTTCTAGACATTGGTGTGGAAGCTTGTTCAAATCTGGATGCATCGGTTAAAGTTGTAGGTTGTTCACCTATGATGGAAGGTTCCAGCAAAACTTGTGCAGAATCTCAACTGCAACTGGTAAAAATATCTGCTGCTACCCAGAAAGAACAGTTAGATTTGTCTACTCCAAGTGAAAGGCCACCTCTCACACTATTTGGAAAAGCTAGATTTGGTTTCCAAGATTCTACTTTTCAGCATGAACAGGAGAAAACAATGGTCATGAAATCTGATCCTCAACAAATAGTAACTAATAGAGCAGAAAATGAATCCTCAAGCCAGGATGTTGAATTGGAATGTGAGAATTCCTTGGAGAAAAAAATAGAGGTAGATGTTACTGAAGTACCAAGTGAAAAGTTAGTGGAGAAAGAAACTGAAGTTTGCAAGATTGCTTCTCAGGCCCCCATCATATTGTCAAGGGGCTTTAATGAAAGCTTGAGAAATTTGTACAGGTCAATGAATGTGTCTGTGCCTCAGCCTCTTCCCTCACTGGTGGAACTTATGAATTCCAATAAACGTGCCAAGAAGATGCGTTGGCGCTGA 1659 0.4316 MPIEMPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQLDDSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRLIPECLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITSSDPLWKLLDIGVEACSNLDASVKVVGCSPMMEGSSKTCAESQLQLVKISAATQKEQLDLSTPSERPPLTLFGKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENESSSQDVELECENSLEKKIEVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLVELMNSNKRAKKMRWR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1516 552 Gene3D - 159 310 - -
Vvi4g1516 552 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 444 - -
Vvi4g1516 552 FunFam DNA repair metallo-beta-lactamase family protein 159 310 - -
Vvi4g1516 552 Gene3D - 10 331 IPR036866 -
Vvi4g1516 552 FunFam DNA repair metallo-beta-lactamase family protein 9 176 - -
Vvi4g1516 552 Pfam DNA repair metallo-beta-lactamase 227 335 IPR011084 -
Vvi4g1516 552 SUPERFAMILY Metallo-hydrolase/oxidoreductase 12 339 IPR036866 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1516 K15340 - vvi:100254013 1126.31