Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1513 ATGGGCGTCCGGTGGAATGGCTTGGGAACTTTGATTTGCTTGTGTTTTGCAGTTGAATTGCCCTGGCTGTGGATCACAGTGGTTGTGAGTGCAAATGCTAGAGTATGGCTAGGGGGAGTGTCACACTGTTGTGTTACTGGAATGGGAAGAAGACAAAAGGAGAACATGGCATTGCTTACGAAGGCGCTGCTCCAAGGCCCATCAGGACAGAGGTTGGCCAGATTTATGCGGGAGTGGCCTCTAGATCATCGTGTGCGTCCATACATCATCCAAGCTGGATTCTATGGGGTATACAGAGTTGGATTTATACAGTTGGACTGGACATTAATTACAGCTTTAGTAGAGAGATGGCGACAGGAGACCCACACCTTCCATCTTGCTGTGGGTGAGAGCACTATCACTCTACAAGACACAGCAGTATTATTGGGCCTTCGAGTACATGGTGATCCAGTTACCGGCACCACTGATGTACAGTGGCCTAACCTGTGCGAGGAGTTGTTGGGGAGGAGACCTGATGGCAATTCTCTTCAGGGGTCAGCTCTCAAACTTAGTTGGTTACGGATGCATTTCTTGCAGCCACCTTCAGATGCAGACGATCTTATAGTGCAACAGTATGCCAGGGCGTATATCTTGGCATTGATAGGTGGTGCCCTCTTTGCAGATAAGTCAGGATCAGATGTCCAGTTAATATTTTTGCCCTTACTTAGGGATTTTGTGGCTGCGGGACGACTGAGTTGGGGTAGTGCCACGTTGGCCCACTTATATCGAGAGCTCTGTCGAGCCAGTAAGGCAGGGGCATCAGAAATTGCTGGCCCTCTTATACTTCTACAGCTATGGGCATGGGAGCGATTGCATGTTGGTCGGCCTGAAAAACGAGTTTCCCGGAGTCAACATATGGTTATACCAAGGGGGGAGTGTGTAGGGGCAGAACCACCATTTTTGGATGTTGCAGATGGGGCAGTCATCAATGATCAAACATTACCTGTGGATCCATTAGGATGCATATCAAATACGGGCTTTCAGCCTACAGCAGTGACCACACACTTACTTGTTCAGAGCTTGACTAATATTCATAAACAGTGTGGCATGACGGTCAGTGCTTTCAACAGTGATGATGCACATAGTGCATTGATAAATATCCAAACCATTTGTAGTGATGTCTTGCGCTTGATTGGTGAAGGTCGCCAGCTTGAGGTAGCACACAAACTTGCACCTCCACCTCCAAGTGTGGCCAGAGAACCTGTTAGACAGCAATGTCGAGGTAGAGCTCGTGGTGGAAGGCATGGCATAATACACCCTGCAGCAGTTTCATCCTTAGTTTCACCAGCCACACTTGCGATATCACTACCTGATGCTTCTGTAAAAGCAAGAGATGATAAGCCATTTTTAGCACCATCTCTGGCAGCAATGTCAGCATCAGCAGCCTCACCAAAACCACAAACTCCATCAGATCCTGACTCCATTGAGGGCCCATCACGGGTTGCTCAGGAGGTTGCTTCTTCTATTCTCTCTACAACAATTACGGTTTCTTCAATTAGAAAGCGAAGTCGAGGTAGAGGTAGTAGCAAAGGTCATTTGTGTGGTCCAACAGAAAATGTAGGAATACCCATAGTAATTCCAGTAGACAGGTCATCGTCACAACCACCGCCATCCCCAAGAGTAGCATCAAAAGCAACGGTAAGACTAGAGGGGCTAGCTCAGGTCACCCAGGGGGCTGCTTCAACACCTCTTGCTGAATTAGCATCGCTAGCTACTCCATTAGACACAGCACCATCACCCTCTATGGTATTATCAGAAGCAATGACATCATCAACTACAGTAGACATCAACCCTATTGAGGGGCTATCTGAAGTCATTGACAAGAGTGCAGCTACACCTCCCCCTACCTCAGCATCACCTTCAGATGATTTCATTGAGGGCATGTCTCGGTCTACTCAGGTGGCTGCATTAGCACCTCCCCCTACTGCAGCAACACCTTTGGTCATTTCAGCAAACGTGGCTCCGCTGTCACCATCAGCAGTAGCATCAGAAGCAGTGGTATCATCAATAGCCCCACCTCCATCAGTTATCAGTTCCATTGAGGGGCCATCCCAAGTCACTAAGAATGCTGCATCAGCACCTTCCCCTATCAGAGTTACAGCTCCACCAAGTGAAGGACAAGGCAGAGGCAAAGTAGTCCGGGTTGATCTAACCAAGACCATGCCAACATCCTCTGCAATGCCATCAGATCCACCAGCTTCACTCCTGAATATAATAAGTAAGAGAGCAAAACACCTTTGA 2280 0.482 MGVRWNGLGTLICLCFAVELPWLWITVVVSANARVWLGGVSHCCVTGMGRRQKENMALLTKALLQGPSGQRLARFMREWPLDHRVRPYIIQAGFYGVYRVGFIQLDWTLITALVERWRQETHTFHLAVGESTITLQDTAVLLGLRVHGDPVTGTTDVQWPNLCEELLGRRPDGNSLQGSALKLSWLRMHFLQPPSDADDLIVQQYARAYILALIGGALFADKSGSDVQLIFLPLLRDFVAAGRLSWGSATLAHLYRELCRASKAGASEIAGPLILLQLWAWERLHVGRPEKRVSRSQHMVIPRGECVGAEPPFLDVADGAVINDQTLPVDPLGCISNTGFQPTAVTTHLLVQSLTNIHKQCGMTVSAFNSDDAHSALINIQTICSDVLRLIGEGRQLEVAHKLAPPPPSVAREPVRQQCRGRARGGRHGIIHPAAVSSLVSPATLAISLPDASVKARDDKPFLAPSLAAMSASAASPKPQTPSDPDSIEGPSRVAQEVASSILSTTITVSSIRKRSRGRGSSKGHLCGPTENVGIPIVIPVDRSSSQPPPSPRVASKATVRLEGLAQVTQGAASTPLAELASLATPLDTAPSPSMVLSEAMTSSTTVDINPIEGLSEVIDKSAATPPPTSASPSDDFIEGMSRSTQVAALAPPPTAATPLVISANVAPLSPSAVASEAVVSSIAPPPSVISSIEGPSQVTKNAASAPSPIRVTAPPSEGQGRGKVVRVDLTKTMPTSSAMPSDPPASLLNIISKRAKHL* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1513 759 PANTHER PROTEIN MAIN-LIKE 2 82 294 IPR044824 GO:0010073|GO:0048507
Vvi4g1513 759 MobiDBLite consensus disorder prediction 694 724 - -
Vvi4g1513 759 MobiDBLite consensus disorder prediction 510 532 - -
Vvi4g1513 759 Pfam Plant mobile domain 93 295 IPR019557 -
Vvi4g1513 759 MobiDBLite consensus disorder prediction 471 496 - -
Vvi4g1513 759 MobiDBLite consensus disorder prediction 473 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1513 Vvi-Chr4 22767813 22771992 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1513 - - vvi:104879179 710.294