Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1505 ATGGTGAACAGCAGGGGTTATTCCCACTCGAGAGCCTCTTCAACATCTAAGTTTCTCCCCAGGAAACCAACTCTTTATACCATCACTGTGTATATAATCCTTCTCTTTGCCTTCTCCATTGTCATATTTCTATTCTATACGAGGGATGTTTTGGAAGATGAACAGAAGCCCCTGTCCTCGGAGGATTCTCAGTTTGTGCAGATGCAAGATGAACTTTGGAATGCTCCATCCAGCCATGGTTTACACCCTTGTGTCAAGCCTACTTCTAAATATAAAGCCACCCAAGGATGGGATCGTTATATGACAGTAAAAAGCAATGGAGGACTAAATCAGATGCGTACTGGTATATCTGATATGGTGGCTGTGGCACGCATAATGAATGCAACTCTAGTAATTCCTCAACTGGATAGACGCTCATTTTGGAAAGATTCAAGTACGTTTGCTGATATATTTGATGAACTTCATTTCATGACAACCTTGCAAGGGGATGTGAGGATTGTCAAAGAGCTCCCTAGGCAGTTGGAGTCTGTTCCTCGAGCTCGGAAGCACTTCACATCCTGGTCTAGTATGGGCTACTATCAGGAGATGACACATTTATGGGAGGAATATCAGGTGATTCATGTTGCAAAATCTGATTCTCGACTTGCAAACAATGATTTGCCTATTGATATCCAAAGGTTGAGATGTCGTGCTTTATACCATGCTCTCCGTTTCTCTCCTCAAATAGAGAACCTGGGAAAGAAGCTGGTGGAGCGGCTGAGATCACGCGGTAGAAGATACATTGCTCTTCATCTGAGATATGAGAAAGACATGCTTTCATTTACTGGTTGTACTTATGGTCTCACAGATGCCGAATCTGAAGAGCTGAGAATAATGAGGGAGAACACAAACCATTGGAAGATGAAGAAGATAAATGCAACAGAACAGAGAATAGGAGGCTTCTGTCCGCTAACTCCGAAGGAGATTGGAATATTTCTTCGAGCTCTTGGTTATCTTCCATCGACATTAATTTATATTGCAGCTGGTGAAATCTATGGTGGTGATGCTCGCCTTGTAGAGCTCAAATCCCGCTTTCCGAATTTAATTTTCAAGGAAACAATAGCAACTCAGGAAGAATTGAAAGCATTTGCCCATCATTCGTCTCAAACTGCAGCACTTGATTACATTATCTCTATAGAAAGTGATGTGTTCATTCCTTCACATTCGGGTAACATGGCAAGAGCCGTTGAGGGGCATCGCAGATTCTTGGGTCACGGCAAGACAATCACCCCAGACAGGAAAGGACTTGTTGACATTTTTGATAAACTGGAGGCAGGACAGCTAAAAGAAGGATCATCATTATCATATCTAGTGACACAGATGCACAAGAATAGGCAAGGAGCTCCAAGGAAAAGAGGAGGTTCACTGCCAGGAGTTAAAGGCCGAGCACGGTTTAGAACTGAGGAATCCTTCTATGAAAATCCATACCCAGAGTGTATATGTAGTTCAAAGAAACATTAG 1500 0.4267 MVNSRGYSHSRASSTSKFLPRKPTLYTITVYIILLFAFSIVIFLFYTRDVLEDEQKPLSSEDSQFVQMQDELWNAPSSHGLHPCVKPTSKYKATQGWDRYMTVKSNGGLNQMRTGISDMVAVARIMNATLVIPQLDRRSFWKDSSTFADIFDELHFMTTLQGDVRIVKELPRQLESVPRARKHFTSWSSMGYYQEMTHLWEEYQVIHVAKSDSRLANNDLPIDIQRLRCRALYHALRFSPQIENLGKKLVERLRSRGRRYIALHLRYEKDMLSFTGCTYGLTDAESEELRIMRENTNHWKMKKINATEQRIGGFCPLTPKEIGIFLRALGYLPSTLIYIAAGEIYGGDARLVELKSRFPNLIFKETIATQEELKAFAHHSSQTAALDYIISIESDVFIPSHSGNMARAVEGHRRFLGHGKTITPDRKGLVDIFDKLEAGQLKEGSSLSYLVTQMHKNRQGAPRKRGGSLPGVKGRARFRTEESFYENPYPECICSSKKH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1505 499 Pfam GDP-fucose protein O-fucosyltransferase 100 415 IPR019378 -
Vvi4g1505 499 PIRSF UCP009360 2 498 IPR024709 -
Vvi4g1505 499 PANTHER OS02G0726500 PROTEIN-RELATED 28 495 - -
Vvi4g1505 499 FunFam O-fucosyltransferase 28 230 425 - -
Vvi4g1505 499 CDD O-FucT_plant 100 421 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1505 Vvi-Chr4 22605368 22630739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1505 70 494 Miscellaneous Gene Families AT1G22460 57.746 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1505 - - vvi:100242141 1008.05