Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1502 ATGGAACGAGGGCAACTCTTATTGGGAGAGAACCCGAGTGCTCAAAAGGTGGATCCAAACCATGGCAAAGATTGTGGTGGAGCCATGGGCTCCTCGGCATCAAGTACTTCCAAGGGATCCCGAGATTTATCCAATGGCTCTGAATCGTTTCGAAGGCTAGAGGTGGGTGTACCAAACACCAACTCCTCACAGAAGAAGCTCTCTTGGTTGAGATCCCAAATTGTGGGTGGGGACGCAGAGTTCAGCTCCCCCTTTGGAGTCCGCAGGCTCACCTATGCTGATCATACTGCCTCAGGCCGGTGTCTACGCTACATCGAAAACTACATCAACGATAATGTTCTTCCCTTCTATGGGAACACTCATACCTGCGATAGTTTTGTGGGAAGCCGGACTACAAAAATGGTGCATGAAGCCACCAGGTACATCAGGAAGTGCCTAGGCGGTCGACAAGATGATGCACTCATGTTCTGCGGCTCAGGCACCACTGCAGCCATCAAACGGCTACAAGAGGTAATGGGGATCACTGTTCCATCCGTTCTGAGAGAGAGAGTATTGAAAACTTTTAGGAGCGAGGAAAGATGGGTTGTCTTTGTGGGGCCTTATGAGCACCACTCCAACCTCCTGTCATGGAGGCAAAGCCTAGCAGAAGTGGTGGAGATTGGTTTGGATGATGATGGCCTACTCGACATGGAAGCTCTAAGACTACAACTTGAATCTTATCGCCGCTCCAACCGCCCCTTGCTGGGTTCTTTCTCAGCTTGTAGTAATGTAACCGGAATATTTACAGACACCCGAGCGCTGGCTCAGCTTCTTCACCGATATGGAGGTTTTGTATGCTTTGATTTTGCTGCAAGTGGTCCTTATGTGGAAATTGATATGAGATCGGGCGACATTGATTGCTACGATGCCATTTTTTTAAGTCCACACAAGTTTCTCGGCGGACCTGGGTCCCCGGGTATCCTTCTAATGAGCAAGGCGCTCTACCAACTCGGTTGTTCAGCTCCATCAACTTGTGGGGGTGGGATTGTTGATTTTGTCAATGGCTTTAACGAAAAGGACACATTATATTTGGAGGACATAGAGGGAAGGGAAGATGTTGGAACTCCACCCATCATCCAGAAAACCAGAGCAGCATTGGCTTTCTGGGTAAAGGAATACGTTGGCTACAACGTTATAGAAGAAGAGGAGAACAATTACACTGAAGCAGCACTGGAGAGGCTTCTACCAAATCCAAACATATGGGTTTTAGGAAATACAACCGCAAAGCGTCAAGCCATCCTGTCATTCCTTGTTTACTCCACCACAAACTCTGCCTCAGATGACATGAGTAGAGAGGAAACAAAGGGAAGGTTTTACATGTGGAGAGAGACGGGGAATAGAAAAGATAAGCCTCTTCATGGACCTTTTGTTGCAAAGCTCCTCAACGACCTGTTTGGCATCCAAGCTCGAGGTGGGTGTGCTTGTGCTGGACCCTACGGTCACAGCTTGCTCAAGGTGGATGAGACCCAATCCCTTGCATTCAGATCCGCCATCCAAAAGGGTTATTCAGGAATCAAACCCGGGTGGACGAGAATTAGCTTCCCCTACTACATGTCAAGCGAGGAGTTCGAGTTCATCCTAGATGCACTGGAATTCATAGCTACTTACGGCCAGCGCTTCCTCCCTCTGTATCACTTCAACTGGAAAACAGGCAGCTGGAGCTTCAGGAAGAAGGCACTCAAAGATACCTCGACTCCAACACTCTCTCTCTTCAAGGCCATGCCAGCATTTAGTTCAATCAGTGATGGATCAAGACTACACACCCATGCTGGCAATAAAGATGAAATAATCAGCAGATACGCATCATATCTGGCGACTGCAAACAAAATCGCCAGTCTCCTTGAGAAGTTCCCTCCCCATCGTAGAATTCCAGAAGACATAGATGTCAACCTCATCACATTCAGAGTGTAG 1950 0.4821 MERGQLLLGENPSAQKVDPNHGKDCGGAMGSSASSTSKGSRDLSNGSESFRRLEVGVPNTNSSQKKLSWLRSQIVGGDAEFSSPFGVRRLTYADHTASGRCLRYIENYINDNVLPFYGNTHTCDSFVGSRTTKMVHEATRYIRKCLGGRQDDALMFCGSGTTAAIKRLQEVMGITVPSVLRERVLKTFRSEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDDDGLLDMEALRLQLESYRRSNRPLLGSFSACSNVTGIFTDTRALAQLLHRYGGFVCFDFAASGPYVEIDMRSGDIDCYDAIFLSPHKFLGGPGSPGILLMSKALYQLGCSAPSTCGGGIVDFVNGFNEKDTLYLEDIEGREDVGTPPIIQKTRAALAFWVKEYVGYNVIEEEENNYTEAALERLLPNPNIWVLGNTTAKRQAILSFLVYSTTNSASDDMSREETKGRFYMWRETGNRKDKPLHGPFVAKLLNDLFGIQARGGCACAGPYGHSLLKVDETQSLAFRSAIQKGYSGIKPGWTRISFPYYMSSEEFEFILDALEFIATYGQRFLPLYHFNWKTGSWSFRKKALKDTSTPTLSLFKAMPAFSSISDGSRLHTHAGNKDEIISRYASYLATANKIASLLEKFPPHRRIPEDIDVNLITFRV* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1502 649 PANTHER CYSTEINE DESULFURASE 59 552 - -
Vvi4g1502 649 SUPERFAMILY PLP-dependent transferases 84 544 IPR015424 -
Vvi4g1502 649 Gene3D - 91 371 IPR015421 GO:0003824
Vvi4g1502 649 Gene3D Aspartate Aminotransferase, domain 1 372 550 IPR015422 GO:0003824
Vvi4g1502 649 MobiDBLite consensus disorder prediction 1 60 - -
Vvi4g1502 649 MobiDBLite consensus disorder prediction 29 46 - -
Vvi4g1502 649 Pfam Aminotransferase class-V 94 432 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1502 Vvi-Chr4 22551652 22554070 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1502 - - vvi:100253890 1308.51