Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1501 ATGGAGCTAGACAAATTCATCTTTGGAGAGAGTAATGGTGATCAGAAGGCGGATGCAAGTGATGGAGAAAACCAGAGTGGAACTTTGGCTTCATTTTTATCGAGTGACTCTGAGGCTCCAGATGATCTGTCCCATGGCTCGGAATCGTTTAGTATGCAAGATCTGGATGCACCAAGGGCCATCTCCATAGAGAAGAAGCTGTCTTGGCTGCGCTCCCAAATCGTGGTTGGTGATGCAGAATTCAGCTCTCCCTTTGGAACCCGCAGGATAACCTATGCTGATCACACCGCCTCAGGCCGGGGTCTGCACTTCATCGAAAACTATATCGTCAACAATGTTCTTCCCTTCTATGGAAACACTCACACATGCGATAGTTTCGTGGGAGACCAGACTACAAAAATGGTGCATGAAGCGACCAAGTATGTAAAGAGGTGTCTGGGTGGTAAACCAGACGACGCACTACTGTTCTGTGGCTCTGGCACCACTGCAGCAATCAAACGGCTACAAGAAGTAATGGGAATCACTGCTCCATCGATTGTGAGGGAGAAGGTATTGGAGACTCTAAGGAACGAAGAAAGGTGGGTAGTTTTTGTTGGGCCTTATGAGCACCACTCCAATCTCCTTTCATGGAGGCAGAGCCTAGCAGATGTTGTGGAGATTGGTCTGGATGACAATGGCTTACTCGACATTGAAGCTTTGAGACAAAAACTTGAGTCATACCAACACGCCAATCGCCCGCTATTGGGTTCTTTCTCAGCTTGTAGTAATGTAACCGGAATTTACTCCAACACTCGAGCTCTGGCTGAGCTTCTTCATCAGTACGGAGCCTTTGCATGTTTTGATTTTGCTGCAAGTGGCCCTTACGTGGAGGTCGACATGAGATCAGGGGAGATTGATGGCTACGATGCTATTTTCCTTAGTCCCCACAAGTTTCTGGGAGGACCTGGAACCCCTGGCATTCTTCTAATGAGCAAAATCCTCTATCGGCTGGGTTCCTCCCCTCCATCAACTTGTGGGGGTGGAACTGTTTCTTTTGTCAATGGCTTCAATGAAAAGGACACCTTATATGCGGATGACATAGAAGAAAGGGAAGATGCCGGAACTCCACCCATCATCCAGAAAATCAGAACAGCGTTGGCTTTCTGGGTAAAAGAATACATCGGCTACAATGTTATCGAACAACTGGAGCACAAGTACACTGAAGCAGCGTTGCAAAGACTTCTTCCAAATCAAAACATAGGATTTTAG 1248 0.4712 MELDKFIFGESNGDQKADASDGENQSGTLASFLSSDSEAPDDLSHGSESFSMQDLDAPRAISIEKKLSWLRSQIVVGDAEFSSPFGTRRITYADHTASGRGLHFIENYIVNNVLPFYGNTHTCDSFVGDQTTKMVHEATKYVKRCLGGKPDDALLFCGSGTTAAIKRLQEVMGITAPSIVREKVLETLRNEERWVVFVGPYEHHSNLLSWRQSLADVVEIGLDDNGLLDIEALRQKLESYQHANRPLLGSFSACSNVTGIYSNTRALAELLHQYGAFACFDFAASGPYVEVDMRSGEIDGYDAIFLSPHKFLGGPGTPGILLMSKILYRLGSSPPSTCGGGTVSFVNGFNEKDTLYADDIEEREDAGTPPIIQKIRTALAFWVKEYIGYNVIEQLEHKYTEAALQRLLPNQNIGF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1501 415 Pfam Aminotransferase class-V 113 413 IPR000192 -
Vvi4g1501 415 Gene3D - 107 384 IPR015421 GO:0003824
Vvi4g1501 415 MobiDBLite consensus disorder prediction 1 50 - -
Vvi4g1501 415 PANTHER CYSTEINE DESULFURASE 61 413 - -
Vvi4g1501 415 MobiDBLite consensus disorder prediction 18 50 - -
Vvi4g1501 415 SUPERFAMILY PLP-dependent transferases 84 408 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1501 Vvi-Chr4 22531684 22533280 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1501 - - vvi:100243660 832.402