Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1500 ATGGAACTAGAGCAACTCTTGTTCGGAGAGAGCATTAGTGCTCCAAAGGCGGACCGGAGCCATGTCAAAACTTATGAAACCATGGCCTCATCCATATCAAGTAGTTCCAAGGACTCAGATGAGTTGTCCCATGCCTCCGAGTCCTTTACTATGATAGACATGAGTGTACCAAAGACCGTCTCTGCAGAGAAGAAACTAGCTTGGTTACGCTCCCAGATCGTCGTAGGTGATGGAGAATTCAAATCCCCCTATGGACTCCGCAGGGTCACCTACGCTGATCACACTGCCTCCGGCCGGTGCCTACACTACATTGAAAACTATATCGTCAATAATGTTCTTCCCTTCTATGGAAACACTCACACATGTGATAGTTTCGTCGGTGATCGGACCACAAAAATGGTGCATGAAGCCACCAAGTACGTAAAAAAGTGTCTTGGCGGTAAACAAGATGATGCACTCGTCTTCTGTGGCTCGGGCACCACCGCAGCTATCAAACGGCTACAAGAAGTAATGGGGATCACTTCTCCGTCGATTATGAGGGAGAGGGTATTGAAGACCCTAAGGAGTGAAGAAAGATGGGTAGTTTTTGTTGGGCCTTATGAGCACCACTCCAATCTCCTATCATGGCGGCAAAGTCTAGCAGAAGTAGTGGAGATTGGTCTGGATGAAAATGGCTTAATCGACATGAAGGCTCTAAAGCAACAGCTTGAGTCATATAAATACACCAACCGCCCGTTATTGGGTTCTTTCTCAGCTTGTAGTAACGTGACTGGAATTTACACCAACACCCGCGCCCTTGCGAAAATTCTTCATCAGCATGGAGCCTTTGTGTGCTTTGATTTTGCTGCAAGCGGTCCTTACGTGGAGATCGACATGAGATCGGGAGAGATTGATGGCTATGATGCCATTTTCCTTAGTCCCCACAAGTTTCTTGGAGGACCTGGGACCCCCGGCATCCTTCTAATGAGCAAAGTCCTCTATAATCTGGCTTCCTCTCCTCCATCAACTTGTGGTGGTGGAACTGTTGCCTTCGTCAATGGCTTCAATGAAAAGGACACTTTATACGTGGATGAAATAGAAGAAAGGGAAGACGCCGGAACTCCGCCAATTGTTCAGAAGATCAAAACAGCTCTGACTTTCTGGGTGAAAGAATACATCGGTTACAATGTTATCGAACAGATGGAGCACATGTACATCGAAGCAGCACTGGAGAGGCTTCTGCCTAATCCAAACATAAAAGTTTTGGGAAATACAAGCGCAAAGCGACAAGCTATCCTGTCCTTCCTCGTATACTCAACTACCAACTCTTCCTCGGACGGCATGAAAGATAGTAGAGGTGACATAGAGGGGAGATTTTACATGTGGAGAGAGACAGGAAACAAGAGGGGTAAGCCTCTTCATGGGCCTTTTGTCGCAAAGCTCCTCAATGACCTGTTTGGGATTCAAGCTCGAGGTGGGTGTGCTTGTGCTGGACCCTATGGTCACAGCTTGCTCAACGTGGATGAGACCCGTTCACTCGCATTCAGATCCGCCATCCATAATGGTAACAACGGAGTGAAGCCCGGATGGACCAGAATCAGCTTCCCCTACTACATGTCCATTGAGGAGTTCGAGTTCATTCTGGCTGCATTGGAATTCATAGCTACTTACGGCCAGAGGTTCCTTCCTTTATACAACTTCAATTGGAAAACAGGCAACTGGACTTTCAAGAAGAAGGCACTCAAAGACGCACTAGCAGGGAAGGAAAACAACGGCAACTTCGGTGGCTTGAGTCTGGCCAGGGGCATGCAGGCATCAATAATGAGTAACCAATCAGAAGCACAACACAACAACGCTGATGAAAATGATGAAATCATCAACAAATACACATCATATTTGGAGACTGCTAAACGCATTGCTAGTCTCCTTGAAAAGTTCCCTCCTCACCGTCGGGTTCCGGAAGACATAGATCTCAACCTCTGCACCTTCAGATGCTAG 1977 0.4719 MELEQLLFGESISAPKADRSHVKTYETMASSISSSSKDSDELSHASESFTMIDMSVPKTVSAEKKLAWLRSQIVVGDGEFKSPYGLRRVTYADHTASGRCLHYIENYIVNNVLPFYGNTHTCDSFVGDRTTKMVHEATKYVKKCLGGKQDDALVFCGSGTTAAIKRLQEVMGITSPSIMRERVLKTLRSEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDENGLIDMKALKQQLESYKYTNRPLLGSFSACSNVTGIYTNTRALAKILHQHGAFVCFDFAASGPYVEIDMRSGEIDGYDAIFLSPHKFLGGPGTPGILLMSKVLYNLASSPPSTCGGGTVAFVNGFNEKDTLYVDEIEEREDAGTPPIVQKIKTALTFWVKEYIGYNVIEQMEHMYIEAALERLLPNPNIKVLGNTSAKRQAILSFLVYSTTNSSSDGMKDSRGDIEGRFYMWRETGNKRGKPLHGPFVAKLLNDLFGIQARGGCACAGPYGHSLLNVDETRSLAFRSAIHNGNNGVKPGWTRISFPYYMSIEEFEFILAALEFIATYGQRFLPLYNFNWKTGNWTFKKKALKDALAGKENNGNFGGLSLARGMQASIMSNQSEAQHNNADENDEIINKYTSYLETAKRIASLLEKFPPHRRVPEDIDLNLCTFRC* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1500 658 Gene3D Aspartate Aminotransferase, domain 1 359 552 IPR015422 GO:0003824
Vvi4g1500 658 PANTHER CYSTEINE DESULFURASE 36 553 - -
Vvi4g1500 658 Pfam Aminotransferase class-V 93 431 IPR000192 -
Vvi4g1500 658 Gene3D - 106 341 IPR015421 GO:0003824
Vvi4g1500 658 SUPERFAMILY PLP-dependent transferases 82 545 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1500 Vvi-Chr4 22516462 22518881 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1500 - - vvi:100265977 1316.21