Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1492 ATGTTTGAGATGATGGATAGTTTCAACAGGACCGCATCATTCAACCGCAGGGCATCGAGTTTTAGTAGCCCAAGAGTTCACCGAAGGAGATGGGGTCGGCCACCCTTTCTAGTTTTCATTGGGTTTCTGGTATTCTGTTTCTTTAAAATCATTGCTTCTGGATACATAAATGCCTCACCAGGTTCTAACCAGGGCTTTGATGGATATAGCATTTCCAATTTCAATGGTTCTGTGGGTGTTTGCAATGTTTTTGAAGGCAATTGGGTCCAAGATAATAGTTACCCATTGTACAATGCTTCTGAATGTCCTTTTGTGGAACAGGGATTCAATTGCTTGGGAAATGGGCGAATGGACAGAGATTATCTTAAATGGAGGTGGAAGCCCCGGAATTGTGATATTCCAAGGTTTAATGTGCAGAATGTATTGGAACGACTCAGAGGGAAAAGGGTTGTTTTTGTGGGGGATTCAATGAGTAGAACACAGTGGGAGTCTTTGATATGTTTTCTAATGACTGGGGTGGAGGATAAGAAGGGTGTTTATGAAGTTAATGGGAATAACATAACGAAACGGATTAGATTTTTAGGTGTACGGTTCAGTTCATTTAACTTCACGGTTGAGTTCTTCCGCTCAGTTTTCTTGGTACAGCATGGCTGGGGTCCCAAAAATGTACCAAAGAGGGTCAGGTCAACACTTAAATTGGACAAATTGGATAATATTAGCAGGGAGTGGATTAATTCAGATGTTCTTATTTTCAACACAGGACAATGGTGGGTGCCAGGGAAGCTTTTTGAAACGGGTTGCTATTTCCAGGTTGGAGGTTCATTGAGGCTTGGAATGTCAATTCCTGCTGCCTTCAGAATAGCACTGGACACTTGGGCTTCATGGATTGAGACCACAATTGACACCAGAAGAACACAGGTCTTCTTTCGGACATTTGAGCCATCACACTGGGGCAATGAAACTCATAGACATTGTAATGTAACACTGCACCCTATGTCAGACACCAAAGGGACGGACAGAAGCCTATTTTCAGATACCATATTGGAGGTGGTAAAGAATATGACTGTTCCTGTGACTGTTCTGCATGTGACTTCCATGTCAGCTTTCCGGAGTGATGCACATGTGGGTACTTGGAGTGATGGTCAACCTGTGTCTGATTGTAGCCACTGGTGTCTGCCTGGAGTTCCTGATGTGTGGAACGAGATTTTCCTCTCATATATGCTTACTAACCATAGACTTTCTCTCAGATGA 1251 0.4309 MFEMMDSFNRTASFNRRASSFSSPRVHRRRWGRPPFLVFIGFLVFCFFKIIASGYINASPGSNQGFDGYSISNFNGSVGVCNVFEGNWVQDNSYPLYNASECPFVEQGFNCLGNGRMDRDYLKWRWKPRNCDIPRFNVQNVLERLRGKRVVFVGDSMSRTQWESLICFLMTGVEDKKGVYEVNGNNITKRIRFLGVRFSSFNFTVEFFRSVFLVQHGWGPKNVPKRVRSTLKLDKLDNISREWINSDVLIFNTGQWWVPGKLFETGCYFQVGGSLRLGMSIPAAFRIALDTWASWIETTIDTRRTQVFFRTFEPSHWGNETHRHCNVTLHPMSDTKGTDRSLFSDTILEVVKNMTVPVTVLHVTSMSAFRSDAHVGTWSDGQPVSDCSHWCLPGVPDVWNEIFLSYMLTNHRLSLR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1492 416 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 133 405 IPR026057 GO:0016740
Vvi4g1492 416 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 49 404 IPR029962 GO:0016413
Vvi4g1492 416 Pfam PMR5 N terminal Domain 81 132 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1492 Vvi-Chr4 22391451 22399497 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1492 - - vvi:100257418 867.84