Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1490 ATGCTGGAAAGCTTAGCATGGGTTGAGAATACTGGGGCTTATATCACAAGAATGTCTGACAATACTGGGGCTTATATCACAAGAATGTCTCCTGGACTTGATAAATGGAGACAAGAAAATCTTGATCACTCTCGGAGGGAGAGTTGGAGTAAGACATACAGGAGCAGGAGTCCAAGCCCTGCCCCTGGCTTTAAGTGCGATTCAACTCCCCATGCTACAAAGGAGTACCCAACAAGGTGCCATGAGTTTGAGAAAGGCAAGTCCCAGATAGGTTCATCAAGCAATTATGCCAATCTTGCTGCTTTTGTAGAGCTTAAAGAATCTCAAAATGATGCGACTAAAGAGAGAGAAACCGTCACAAGGAGAAGTACTTACAGAGAGCGAGACCCCAGAAGGAATAGGAGTCTCCCTTGCAGATACTTTACTCCTGGGAATTGCCATCTTGGAAAAGATTGTAGGCTTTCGCATCATGCGAAGGCATGTGTTGATCTGGAAGGAAGGTCAGAAAATGAAAAACTGGAGTTCGGCCAATATTTGTGTAATAAAGACCAACTCAGTGAAGGTCCAAAATGGGCGGATAAAAGCACCATCTCAGGCGTTGGGAGTTCCAGTGAGGGCAAAGATGCAACTGCATGGTCTGTGGATCAGGGATTGGACCATAGATGGGGGAGCAGAAACATTATTGATAAAGACCCTGACAATGAAAGCAAAAAAATGCAAGTAGAAGCAAAGAAACCTCAAGAAAATTGTCCTCTAGAGAAAAGCAATGATGCCAAGGCCATGGTTGCATTCAAATTTCAACTTGTGGAATTCGTTAAGGTGCTTCTAAGCCCCACTTGGAAACAAGGCCAATTGTCTAAAGAGGCTTATAAGAATATAGTGAAGAAGGTGGCTGATAAGGTCATTGCTACCATCGAAGGGCCATATATTCCTCGGACACAGCAGAAAATTGATCAGTATCTGTCTTTATCAAAACCAAAGATTGCCAAACTTGTTCAGGCCTATGTGGAAAAATTTCAGAGCGAAACAAGAAGTTAA 1038 0.4316 MLESLAWVENTGAYITRMSDNTGAYITRMSPGLDKWRQENLDHSRRESWSKTYRSRSPSPAPGFKCDSTPHATKEYPTRCHEFEKGKSQIGSSSNYANLAAFVELKESQNDATKERETVTRRSTYRERDPRRNRSLPCRYFTPGNCHLGKDCRLSHHAKACVDLEGRSENEKLEFGQYLCNKDQLSEGPKWADKSTISGVGSSSEGKDATAWSVDQGLDHRWGSRNIIDKDPDNESKKMQVEAKKPQENCPLEKSNDAKAMVAFKFQLVEFVKVLLSPTWKQGQLSKEAYKNIVKKVADKVIATIEGPYIPRTQQKIDQYLSLSKPKIAKLVQAYVEKFQSETRS* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1490 345 ProSiteProfiles Zinc finger C3H1-type profile. 132 159 IPR000571 GO:0046872
Vvi4g1490 345 MobiDBLite consensus disorder prediction 44 70 - -
Vvi4g1490 345 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 78 237 - -
Vvi4g1490 345 MobiDBLite consensus disorder prediction 109 134 - -
Vvi4g1490 345 Gene3D - 77 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1490 Vvi-Chr4 22338623 22341154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1490 - - vvi:109122474 709.909