Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1485 ATGACGAAGTTCAGAAAGCTTGGTCGGCCCACTGGCCATAGAATGTCCATGCTCAGAACAATGGTGTCGCAGTTGGTGAAGCACGAGCGCATTGAAACCACCGTTGCCAAGGCTAAAGAGATCCGGCGGCTTGCTGATAACATGGTACAACTTGGAAAAGAGGGTTCTCTTTGTGCTGCAAGGCGTGCAGCAGCCTTTGTGCGAGGGGATGATGTGATTCACAAGCTATTCACTGAACTGGCTTATAGATACAAAGATAGAGCTGGTGGATATACAAGATTACTTCGAACTCGCATACGAGTTGGTGATGCTGCACCAATGGCCTATATTGAGTTTATAGATAGAGAGAATGAGCTTAGACAGTCAAAACCTGCAACACCTCAGCCACCACAGAGAGTGCCCTTGGATCCCTGGACAAGATCCCGTCTCTGCAAGCAGTTTGCTCCCCCTAAGGAGGATAAGAGCTCTGATCCTGAGATTTGA 483 0.4845 MTKFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQSKPATPQPPQRVPLDPWTRSRLCKQFAPPKEDKSSDPEI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1485 160 MobiDBLite consensus disorder prediction 120 139 - -
Vvi4g1485 160 Pfam Ribosomal protein L17 17 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Vvi4g1485 160 PANTHER RIBOSOMAL PROTEIN L17 2 131 IPR000456 GO:0003735|GO:0005840|GO:0006412
Vvi4g1485 160 FunFam 50S ribosomal protein L17 1 113 - -
Vvi4g1485 160 NCBIfam 50S ribosomal protein L17 4 114 IPR000456 GO:0003735|GO:0005840|GO:0006412
Vvi4g1485 160 Hamap 50S ribosomal protein L17 [rplQ]. 2 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Vvi4g1485 160 SUPERFAMILY Prokaryotic ribosomal protein L17 3 116 IPR036373 GO:0003735|GO:0005840|GO:0006412
Vvi4g1485 160 Gene3D Ribosomal protein L17 1 113 IPR036373 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1485 K02879 - vvi:100252405 323.168