Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1484 ATGGGTAGTTTAGAGGAGGAGATGTTGGTTCAGATGGTCCATGATTTCATTGAGTCAGAATCTGCAACGCCCCTTTGCTCTTCCACCTCTGAGAGCCTAAATCCCGAGCAACTGCAGTCCAAGTATTTTACTTTACTGGAGGTTTTGAGGAGCAGGACAGATGCTGAGAGTGGGGTTCTTGAGAAGGTGGTGAGGCATATGAGAAACAAGAGGGATGCGGACAGGAGTAACAGTTTGAAGAAATGGTTTGTCAGGAGGCTGAAAATGGATGGGTTTAATGCTTCTCTTTGCCAAACGTCTTGGCCTACTACCTTGGGTTGTTCTGCTGGTGACTATGAATACATTGATGTTGTAATGAAAGGCGATAAGAGTAGTGGTGGTGGTGGTTCAGTGAGAATAATAGTGGACATAGACTTCAAGTCCCAGTTTGGAGTTGCGAGGCCAACATCAGCCTACACACAGCTCTCTGAGGCGCTCCCATCAATCTATGTTGGGAATGAAGACAAACTTGATAGGATAATCAGCATCCTAAGCTCAGCAGCAAAGCAATCACTGAGAGAGAGAGGGCTTCACATACCCCCATGGAGAACAGACGCATACATGAGGGCCAAGTGGCTCTCAGACTGCCACAAAGTACCAGCTCCTCATCATGCCATCGCTTTTAGCAGAGAAAATGGAGAAGCCAAGAGTAGTGCACATGGCTCCTCTAAGCCCTCAAAGTGGGCACCTCCCATGGTGAAACCCAAAACAAGGGATTTGGGTGGTGAGTCTGCCTTGTCTAGTCAATTCTCTAACTTGGGCATCAACTGCTGCTAA 816 0.4743 MGSLEEEMLVQMVHDFIESESATPLCSSTSESLNPEQLQSKYFTLLEVLRSRTDAESGVLEKVVRHMRNKRDADRSNSLKKWFVRRLKMDGFNASLCQTSWPTTLGCSAGDYEYIDVVMKGDKSSGGGGSVRIIVDIDFKSQFGVARPTSAYTQLSEALPSIYVGNEDKLDRIISILSSAAKQSLRERGLHIPPWRTDAYMRAKWLSDCHKVPAPHHAIAFSRENGEAKSSAHGSSKPSKWAPPMVKPKTRDLGGESALSSQFSNLGINCC* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1484 271 NCBIfam uncharacterized plant-specific domain TIGR01615 81 210 IPR006502 -
Vvi4g1484 271 PANTHER OS03G0796600 PROTEIN 7 262 IPR006502 -
Vvi4g1484 271 MobiDBLite consensus disorder prediction 224 257 - -
Vvi4g1484 271 Pfam PDDEXK-like family of unknown function 12 210 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1484 Vvi-Chr4 22259262 22260311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1484 - - vvi:100243761 528.48