Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1480 ATGTCCCCTGTTTTGAGATCTCTCGTGAGATTCCCACCTTTCAATAACCAGTTGTATAACATCAAGCTCTGTTTTGGTTGGAAACCATTGGTTCACGCCACAATCTTCATTGGTGAGCTCGTGACATCAAAATCTCGGGTGGTGACCACGGCTCCGATTGCGGTTGACGGCGTTATTCCGGACAGCACTCTGGGTTATTCCGATGAGAAAGATAAGCTCCAGCAGGCTTCAGTGCCCTCCCTGGCTGCAGGTAAGAAGGTCATCATTTTCTGTGTTCTCGGTGCTTTCACTCCTATTTGCAACGTGAAGCACGTGCTAAGCTTCATTGAGATGATTCCTATATTCCCAATTTACGCAATTTAA 363 0.4656 MSPVLRSLVRFPPFNNQLYNIKLCFGWKPLVHATIFIGELVTSKSRVVTTAPIAVDGVIPDSTLGYSDEKDKLQQASVPSLAAGKKVIIFCVLGAFTPICNVKHVLSFIEMIPIFPIYAI* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1480 120 FunFam Uncharacterized protein 50 116 - -
Vvi4g1480 120 Gene3D Glutaredoxin 50 117 - -
Vvi4g1480 120 PANTHER PEROXIREDOXIN 50 112 IPR037944 GO:0008379|GO:0034599
Vvi4g1480 120 SUPERFAMILY Thioredoxin-like 53 115 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1480 Vvi-Chr4 22216318 22217379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1480 K24140 - vvi:100243939 88.1965