Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1478 ATGGAATCTCTTCAAATGGCTGGGATGGATCACGCACTTTACGATGCCATCAAGCATGGAATTATTGAGTTTGTTGTCAAACTGATGAAACAAGATCATGAATCAATTTGGAGAAAAGGTGTAAAAGGCAGAACAATGTTTTCACATGCAATTGTTCTACGCCAAGAAAAGATCTTTAGCCTAATATATGGGTTGGGTATAAAGAAGAACATAGTAGCACGTCGACATGATATCTTTCATAACAACATTTTACATCTTGCTGGAAAGTTATCTCCTCCCTCTCAGCTTGATCGTGTCTCAGGTGCAGCTTTGCAGATGCAAAGGGAACTACAATGGTTTAAGGAAGTGGAGAGCATGGTACAAGCAAAATATAAAGAAGAGTTCAATGAATATCATAAAACACCAAGTACCGTGTTTACTGAGGAACATGCAACATTGGTGAAAGAAGGGGAAAGCTGGATGAAGAGTACTGCTGCATCATGTATGGTTGTGGCCACTCTCATTGCTGCCCTCATGTTTACCACAGCATTTACACTTCCTGGTGGGACTAAAAGTGATACTGGCATCCCTGTATTTATTGGACATGGTGCATTTATGGTTTTTATTGTGGCTGATTCTCTGTCACTATTCTCTTCATCCACCTCTGTGTTGATGTTCTTAGGAATACTCACGTCGCGCTATGCAGAAGAGGATTTCCTCAAGTCTTTGCCCAACAAATTGATTATTGGTCTTTCCTCACTTTTCTTCTCACTGTTGAGCATGATGGTAGCCTTTGGCTCTGCCATTTATGTTGTTCTTAGTCACCGCATAGCTTGGGTGTCAATTCCACTCATTGTTCTTGCCTGCATTCCAATTACCTTTTTTGCTTTATTGCAATTTCCTCTTCTTGTTGAGATTGTCATGTGCACGTATGGACGTAGCATATTTGACAAGCCAACAGAAGTTCCATACTAA 954 0.4046 MESLQMAGMDHALYDAIKHGIIEFVVKLMKQDHESIWRKGVKGRTMFSHAIVLRQEKIFSLIYGLGIKKNIVARRHDIFHNNILHLAGKLSPPSQLDRVSGAALQMQRELQWFKEVESMVQAKYKEEFNEYHKTPSTVFTEEHATLVKEGESWMKSTAASCMVVATLIAALMFTTAFTLPGGTKSDTGIPVFIGHGAFMVFIVADSLSLFSSSTSVLMFLGILTSRYAEEDFLKSLPNKLIIGLSSLFFSLLSMMVAFGSAIYVVLSHRIAWVSIPLIVLACIPITFFALLQFPLLVEIVMCTYGRSIFDKPTEVPY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1478 317 Pfam Domain of unknown function 152 265 IPR026961 -
Vvi4g1478 317 PANTHER CASKIN 12 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1478 Vvi-Chr4 22169469 22170552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1478 11 274 Miscellaneous Gene Families AT3G12360 23.127 9.56e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1478 - - vvi:100245499 601.668