Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1476 ATGGCAATCCCTGCTTCTCTACTCCCCATTAGCTCTTCTTCACATTCAATCTTTTCTTCTTCTTTGTTGGCTCTGTGTCCTCTGAAGGTTAACCACAGTAGGGCGATGAATTATCGGCGCACAAATGGGCGGTTTGTGATTAACTCTTCCTCTTCTGAAATGGGTTCCATCAACGACTCCATGAATCTCAGGCAGTCACAACTATCTTCCATGACTCCTCTTGGGGTAACTATGAATGATGCTGGCATGTCCAAACCATCATGTAAGTGGCAAAGGGTGTTGCTTAAAGTAAGTGGTGAAGCACTTGCAGGAGATCATACACAGAATATTGACCCAAAGATTACGATGGCAATTGCAAGGGAAGTTGCATCTGTGACTCGGCTTGGCATAGAGGTTGCAATTGTGGTTGGTGGGGGAAATATTTTTCGTGGATCCTCTTGGGCAGGAAGTGGTGGCCTTGATCGTTCTTCTGCTGATTACATTGGGATGTTGGCTACTGTTATGAATGCTATATTTCTTCAAGCAACAATGGAGAGCATTGGCATCCCAACTCGTGTCCAGACTGCATTCCGAATGTCTGAAGTTGCAGAGCCATATATACGTAGAAGGGCTATTAGGCATTTGGAGAAAGGAAGGGTCGTGATTTTTGCTGCTGGAACTGGAAATCCATTCTTCACAACCGATACTGCTGCAGCCCTTCGTTGTGCAGAAATTAATGCAGAGGTTGTGCTGAAAGCTACAAATGTTGATGGGGTTTTCGATGATGACCCCAGGCGTAACCCAAATGCTCGTCTCCTTGATTCTCTTACTTATCAGGATGTGTTGTCCAGAGATCTTTCAGTGATGGACATGACAGCTGTTACTTTGTGCCAAGAAAACAACATCCCTGTTGTTGTCTTCAATGTAACAAAATCGGGTAACATCTCGAGAGCCATTTTGGGAGAGAGGGTTGGTACTTTGGTTGGAGGACCTTGGGTTTCAACAACGGCAGGGACATGA 999 0.4525 MAIPASLLPISSSSHSIFSSSLLALCPLKVNHSRAMNYRRTNGRFVINSSSSEMGSINDSMNLRQSQLSSMTPLGVTMNDAGMSKPSCKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGSSWAGSGGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPNARLLDSLTYQDVLSRDLSVMDMTAVTLCQENNIPVVVFNVTKSGNISRAILGERVGTLVGGPWVSTTAGT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1476 332 NCBIfam UMP kinase 91 321 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vvi4g1476 332 Hamap Uridylate kinase [pyrH]. 88 322 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vvi4g1476 332 PANTHER URIDYLATE KINASE 43 323 - -
Vvi4g1476 332 Pfam Amino acid kinase family 92 301 IPR001048 -
Vvi4g1476 332 CDD AAK_UMPK-PyrH-Ec 91 322 IPR015963 GO:0005737|GO:0006221|GO:0033862
Vvi4g1476 332 SUPERFAMILY Carbamate kinase-like 89 321 IPR036393 -
Vvi4g1476 332 FunFam Uridylate kinase 82 324 - -
Vvi4g1476 332 Gene3D - 82 323 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1476 Vvi-Chr4 22115284 22125097 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1476 K09903 - vvi:100242145 621.698