Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1464 ATGAAGTGGAGAGTTGATTCTGGTTTACATGATGGAAAGGCCAGTGGGGTGGATCTGGTGAGAAGATATTATGATGCAGGTGACAATGTGAAGTTTGGCCTACCCATCACATTCACCATTACAATGATGTCATGGATCATAGTGGAGTATGGGAAGCAAATGAGTGCAAATGGAGAGCTGGGTCATGCCATGGAAGCAGTGAAGTGA 207 0.4493 MKWRVDSGLHDGKASGVDLVRRYYDAGDNVKFGLPITFTITMMSWIIVEYGKQMSANGELGHAMEAVK* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1464 68 Gene3D - 1 68 IPR012341 GO:0005975
Vvi4g1464 68 Pfam Glycosyl hydrolase family 9 2 68 IPR001701 GO:0004553|GO:0005975
Vvi4g1464 68 SUPERFAMILY Six-hairpin glycosidases 2 68 IPR008928 GO:0005975
Vvi4g1464 68 PANTHER ENDO-1,4-BETA-GLUCANASE 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1464 Vvi-Chr4 21920196 21920402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1464 1 68 Glycoside Hydrolase AT4G11050 69.118 1.98e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1464 K01179 - vvi:100259874 127.872