Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1462 ATGCGTGGAAGATGGGAAGAGATGGCCAGCTTCCTTTGTTTTAAACAAAGGCTGCAAAGTATAACCATGACAACGAGAAATAACAATGAAAGGATAGAAGAAAATGCAAGTGTATTAGAAGAAACAGGCAAAGTTCTTGCAAGTTGCAGCTATGAAGATTACACTCAGTGGGGAAAGGAGATGGGTTTGAAGTATGGTTGTCCAGTGGAAGATACCCTTACAGGGCTATCAATACAATGCAGAGGTTGGAAATCAATCTATTTCACAATCTATCCCAAACTCATCATTATTATTAAGAATCATACCCCCTTTCAGATATCAAGCTTGTGGGTGCTACCCTTTGCCTATGTCACCATCAAGTATGCATACAGATTAGCCGAGTTTATTTTGTTTGACAGGCGCAATCCTTTGGGAAGAAGTTTTTTATGTTTGAATTCCAAAGTAAAATTTTACCTTTAA 459 0.3813 MRGRWEEMASFLCFKQRLQSITMTTRNNNERIEENASVLEETGKVLASCSYEDYTQWGKEMGLKYGCPVEDTLTGLSIQCRGWKSIYFTIYPKLIIIIKNHTPFQISSLWVLPFAYVTIKYAYRLAEFILFDRRNPLGRSFLCLNSKVKFYL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1462 152 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 26 89 - -
Vvi4g1462 152 Pfam Cellulose synthase 20 89 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1462 Vvi-Chr4 21881937 21882484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1462 31 88 Glycosyltransferase AT1G55850 68.966 3.13e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1462 - - vvi:100267303 135.576