Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1456 ATGGAGAAGCTCTCTCAGCTCCGCTCTGCAGTGGCTGGTCTTGATCAGATCAGCGAGAATGAGAAATCCGGATTCATTAACCTCGTCTCTCGCTATCTCAGTGGTGAAGCGCAGCACATTGAATGGAGCAAGATCAAGACTCCTACTGATGAAGTGGTGGTTCCTTATGATACTTTAGCACCCACTCCTGAAGATTCAGTTGAAACCAAGAAGCTTTTGGACAAACTTGTTGTGTTAAAGCTCAATGGAGGGTTGGGAACAACAATGGGTTGTACTGGTCCCAAATCGGTAATAGAAGTTCGCAATGGATTGACATTTCTTGATTTAATTGTCATACAGATTGAGAATCTCAACAACAAGTATGGGTGCAAAGTTCCTCTGCTTCTGATGAATTCATTCAACACACATGATGATACGCTGAAGATTGTACAAAAATATGAGAAATCAAACATTGAGATCCATACTTTTAATCAGAGCCAGTACCCTCGTGTGGTTGTTGATGACTTTAGCCCACTGCCGTCCAAAGGAAATACTGGAAAAGATGGGTGGTACCCTCCTGGGCATGGTGATGTGTTCCCAGCCTTGATGAACAGTGGCAAGCTTGAAAAATTATTGTCACAGGGCAAGGAGTATGTCTTTGTCGCCAATTCAGATAACTTGGGTGCTGTGGTTGACCTGAAAATCTTAAATCATTTGATCAAAAACAAGAACGAATACTGTATGGAGGTGACACCCAAAACCTTGGCTGATGTGAAGGGTGGTACCCTCATTTCTTATGAAGGGAAGGTTCAGCTCCTGGAAATTGCACAGGTCCCAGATGAACATGTCAATGAATTCAAGTCAATAGAGAAGTTCAAAATTTTCAATACAAACAATTTGTGGGTGAACTTGAATGCAATTAAGAGGCTTGTGGAGGCTGATGCACTTAAGATGGAGATTATTCCAAACCCCAAGGAAGTGGATGGTATCAAAGTTCTTCAGTTGGAAACCGCGGCTGGTGCAGCAATTAGGTTCTTCGATAATGCTATTGGTATCAATGTTCCCCGCTCCCGTTTTCTTCCTGTGAAGGCAACTTCGGATTTGCTTCTTGTCCAGTCTGATCTTTACACCTTATCTGATGGATTTGTTGTCCGAAACAAAGCTAGAAAGAATCCTGAAAATCCTGTTATTGAGTTGGGGCCTGAATTTAAGAAGGTTGGCAACTTCTTGAGTCGATTCAAGTCAATCCCTAGTATCATTGAGCTGGATAGTCTTAAGGTAGCTGGTGATGTATGGTTTGGGTCTGGTGTTATTCTCAAGGGGAAGGTGAATATCGAAGCTAAGGCTGGGGTGAAATTGGAAATACCCAATGGAGCTGTAGTTGCAAACAAGGTGATCAATGGTCCTCAGGACATCTAA 1398 0.427 MEKLSQLRSAVAGLDQISENEKSGFINLVSRYLSGEAQHIEWSKIKTPTDEVVVPYDTLAPTPEDSVETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGCKVPLLLMNSFNTHDDTLKIVQKYEKSNIEIHTFNQSQYPRVVVDDFSPLPSKGNTGKDGWYPPGHGDVFPALMNSGKLEKLLSQGKEYVFVANSDNLGAVVDLKILNHLIKNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLNAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDNAIGINVPRSRFLPVKATSDLLLVQSDLYTLSDGFVVRNKARKNPENPVIELGPEFKKVGNFLSRFKSIPSIIELDSLKVAGDVWFGSGVILKGKVNIEAKAGVKLEIPNGAVVANKVINGPQDI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1456 465 PIRSF UDPGP 1 465 IPR016267 GO:0003983|GO:0006011
Vvi4g1456 465 Gene3D Hexapeptide repeat proteins 356 465 - -
Vvi4g1456 465 CDD UGPase_euk 82 371 IPR016267 GO:0003983|GO:0006011
Vvi4g1456 465 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 355 IPR029044 -
Vvi4g1456 465 Pfam UTP--glucose-1-phosphate uridylyltransferase 24 433 IPR002618 GO:0070569
Vvi4g1456 465 SUPERFAMILY Nucleotide-diphospho-sugar transferases 11 438 IPR029044 -
Vvi4g1456 465 PANTHER - 1 465 IPR016267 GO:0003983|GO:0006011
Vvi4g1456 465 FunFam UTP--glucose-1-phosphate uridylyltransferase 356 465 - -
Vvi4g1456 465 FunFam UTP--glucose-1-phosphate uridylyltransferase 1 355 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1456 K00963 - vvi:100253896 902.894