Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1452 ATGGGAGTGGGTGAAAGGATTTATATTGCACGTGGAGATGAGTATGGTCTTCTTAAGGATTCAATTCCACATCAACTTGTAGACTCTGGAATTCCGGAAGGAATTCATATGAAGCTATGTGATATTGCCCAAACAGAAGACTTAAATATTTCTTTTCTGACATGCTATTTGCTTGAAAAACTTTTCCTAAGATTACTCCCAGCAGAGTGGCAGCATGCCAAACAGGTAATTTGGAACCCTGGTCATCAAGGCCAACCAAGTTTAGAATGGTTAAGACTGCTATGGACTTATTTGAAGTCATGTTGTGATGATCTCTCAGAATTTTCGAAGTGGCCTATTTTACCCGTTGGGAATAATTATCTCTTGAAGCTGGTTGAAAATTCAAATGTGATAAAAGATGATGGGTGGAATGAGAACATATGTTCTTTGTTATTGAAAGTAGGATGCCTATTTTTGAGGAATGACCTGCCTATAGAGCATCCACAGTTGAAAAATTATGTGCAGCTGCCAACAGCAACTGGCATTTTGAATGCCTTACTGGCACTTGCTCATAATCCGGAGAATGTTCAGAAACTTTTCTGTGATGCATCAGAAGGGGAGCTTCATGAACTCAGGAGTTTTATTCTTCAGTCAAAGTGGTTCTCCGAAGGTCAGATGGATGACACACATAGTGATGTCATCAAACACCTTCCCATGTTTGAATCGTTCAGAAATAGAAAACTAGTATGTTTGAGTAAACCCACTAAATTGCTTAAACCAAATGGTGTGTCTGAAGATCTTTTGAATGATGACTTTGTACGCACGGATTCAGAAAAAGAAAGAATCATTCCGAGAAGGTATTTAGAGGTTAAGGAACCTTCAAGGGCAGAATTCTACAAAGATTATGTAGTCACTTGCACGCCAGAATTTCTTTCACAGCAGGGAGCACTTTCAGCCATTTTACATGATGTGAAACTTTTGATTGAAGAAGATACCTCAATTAAACTTACACTTTCCATCACACCCTTTGTTTTGGCTGCCAATGGGTCATGGCAACAACCATCCAGGCTATATGATCCTCGAGTTCCCGAATTGCAAGACATGCTTCACAGAGAAGTTTTCTTCCCCTCTGACAAGTTCTCAGATCCTGAAACTTTGGAGACTTTAGTTAGCCTTGGCCTTAGACAAAGCTTGGGTTTTACTGGTTTACTTGATTTTGCTAGGTCCGTTTCTATTTTTCATGATTCGAGGGACTCAAAAACACTGGCTCAGGGGAGGAGGTTGCTCACCTGTTTAGATGCTGTAGCATTGAAGCTCTCAACTGAGAACGGAGAAGGTGATTGCAATAGGTGTGAGAATGCCACATTAGGTCAGAACAGCAATGTCTTCTTTAAGGAATCTGGAGATCTTAACCTTGGGGAAAGGAACATTAGGAGATGCAACTTTGAGCTTTTTGGACAAAGACCTGATTTGACCAGAGAAGCTTTACTCCAGGACATGTTTTCAAATGCAAAAAGACCACAGCAAGACGATTGCATCTGGCCAAAGAGTTATTGA 1536 0.4036 MGVGERIYIARGDEYGLLKDSIPHQLVDSGIPEGIHMKLCDIAQTEDLNISFLTCYLLEKLFLRLLPAEWQHAKQVIWNPGHQGQPSLEWLRLLWTYLKSCCDDLSEFSKWPILPVGNNYLLKLVENSNVIKDDGWNENICSLLLKVGCLFLRNDLPIEHPQLKNYVQLPTATGILNALLALAHNPENVQKLFCDASEGELHELRSFILQSKWFSEGQMDDTHSDVIKHLPMFESFRNRKLVCLSKPTKLLKPNGVSEDLLNDDFVRTDSEKERIIPRRYLEVKEPSRAEFYKDYVVTCTPEFLSQQGALSAILHDVKLLIEEDTSIKLTLSITPFVLAANGSWQQPSRLYDPRVPELQDMLHREVFFPSDKFSDPETLETLVSLGLRQSLGFTGLLDFARSVSIFHDSRDSKTLAQGRRLLTCLDAVALKLSTENGEGDCNRCENATLGQNSNVFFKESGDLNLGERNIRRCNFELFGQRPDLTREALLQDMFSNAKRPQQDDCIWPKSY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1452 511 PANTHER SACSIN 249 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1452 Vvi-Chr4 21627949 21629563 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1452 - K17592 vri:117918806 910.983