Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1446 ATGAGGGTCACAATCGTAGTTGGTCTTGTGACAGTTTTTCTAGTTTTTTGTGGGTATGTAGTTGAAGGAAGAGATTTATGGGAAGAAGATTTGATATTGGAGACAGAATTGAAAACCATAAACAAGCCTGCTGTCAAGACCATCGAGACTGAGTATGGAGAGATGTACGACTGTGTCGATGTTTACAAGCAACCTTCTCTTGATCATCCTTTGCTCAAGGATCATGTTGTTCAGATGAGGCCCAGTGCAGCTCTACAGAAGACCCTAAAAGCTTCAAGGATGAGTTATCTCTCTTCAGTAGATCACAAGCCTATCAAAATTGGGTTGGAAGATGGGTGCCCACTTGGGACCGTCCCCATCAGAAGGACTACAAAGGGAGACCTCATAAGAGCCAAGTCTAGCTTCACGAAACACCATTTTAATGACCTTGCAGTCGATGCAGGAGGTAAGGTATATCATGGGGCTGCAGCACGCCTGGGCGTATACAACCCCAGGGCTCAAAATGAGCAACTGAGTGCGGCTGTAATTATGGTCCTGGCCGGTCCCCTTGGTAAAAGGGGCGGCATCCGAACTGGATGGATGGATCCAGGGAGCGGGGATTGGTGGCTGATGATAATGGATGAGTTCAAGCCAATTGGGTACTGGCCGAAGACTTTGTTCGAGGGTTTAAGCCGGCATGCGGACGCAGCACTGTGGGCGGGTTTAGTGTATAGCGGCTCATCCGACTCCCCTCCGATGGGCAGTGGGGTGTACCAAGGGGGCAGCTTTGATCACACTTGTTACATGGCACAAGTGATTGTAGGAAAACCGGGACAGCCTGCCTTTAATCGTCCTGATGATGATGAGGTAGTAGTCCAACAATCTCGATGCTATCATGCTGGTGATAATTCCTATGTGGAGGATGCATACTGGCTCTACCGTTTCTTGTTTGGAGGACCTGGTGGTAGTCTGGAATCGTGCAAGTAA 966 0.4865 MRVTIVVGLVTVFLVFCGYVVEGRDLWEEDLILETELKTINKPAVKTIETEYGEMYDCVDVYKQPSLDHPLLKDHVVQMRPSAALQKTLKASRMSYLSSVDHKPIKIGLEDGCPLGTVPIRRTTKGDLIRAKSSFTKHHFNDLAVDAGGKVYHGAAARLGVYNPRAQNEQLSAAVIMVLAGPLGKRGGIRTGWMDPGSGDWWLMIMDEFKPIGYWPKTLFEGLSRHADAALWAGLVYSGSSDSPPMGSGVYQGGSFDHTCYMAQVIVGKPGQPAFNRPDDDEVVVQQSRCYHAGDNSYVEDAYWLYRFLFGGPGGSLESCK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1446 321 Pfam Neprosin activation peptide 47 134 IPR025521 -
Vvi4g1446 321 Pfam Neprosin 193 313 IPR004314 -
Vvi4g1446 321 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 33 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1446 Vvi-Chr4 21525113 21528537 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1446 - - vvi:104879197 382.489