Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1444 ATGAGGGGCACAATCGTAGTTGGTCTTGTGACAATTTTTCTAGTTTTTTGTGGGTATGTAGTTGAAGGAAGAGATTTATGGGAAGAAGATTTGATATTGGAGACAGAATTGAAAACCATAAACAAGCCTGCTGTCAAGACCATCGAGACTGAATATGGAGAGATGTACGACTGTGTCGATGTTTACGAGCAGCCTTCTCTTGATCATCCTTTGCTCAAGGATCATGTTGTTCAGATGAGGCCCAGTGCAGCTCTACAGAAGACCCTAAAAGCTTCAAGGATGAGTTATCTCTCTTCAGTAGATCACAACCCTATCAAAATTGGGTTGGAAGATGGGTGCCCACTTGGGACTGTCCCCATCAGAAGGACAACAAAGGGAGACCTCATAAGAGCCAAGTCTAGCTTCACGAAACACCATTTCAATGACCTTGCAGTCGATGCAGGAGGTAAGGCATATCATGGGGCTGGAGCACGCCTGGACATATACAACCCCAGGGCTGAAAATGAGCAACTAAGTGCGGCTATAATTATGGTCTTGGCCGGTCCCCTTGGTAAAAGGGGCGGCATCCGAACCGGATGGATGGATCCAGTGAGTGGGGATTGGTGGCTGATGGTACTGGATGATGACAAGCCAATTGGGTACTGGCCGAAGACTTTGTTCGAGAGTTTAAGCCGGGATGCGGACGCAGCACTGTGGGCGGGTTTAGTGTATAGCGGCTCATCCGACTCCCCTCCGATGGGCAGTGGGGTGTACCAAGGGGGCAGCTTTGATCACACTTGTTACATGGCACAAGTGGTTGTAGGAAAACCGGGAGAGGCTACCTTTAATCCTCCTGATGATGATGAGGTAGTAGTCCAACAATCTCGATGCTATCATGCTGGTGATAATTCCTATGTGGATGCAAACTGGCTCTACCGTTTCTTGTTTGGAGGACCTGGTGGTAGTCTGGAATCGTGCAAGTAA 963 0.4829 MRGTIVVGLVTIFLVFCGYVVEGRDLWEEDLILETELKTINKPAVKTIETEYGEMYDCVDVYEQPSLDHPLLKDHVVQMRPSAALQKTLKASRMSYLSSVDHNPIKIGLEDGCPLGTVPIRRTTKGDLIRAKSSFTKHHFNDLAVDAGGKAYHGAGARLDIYNPRAENEQLSAAIIMVLAGPLGKRGGIRTGWMDPVSGDWWLMVLDDDKPIGYWPKTLFESLSRDADAALWAGLVYSGSSDSPPMGSGVYQGGSFDHTCYMAQVVVGKPGEATFNPPDDDEVVVQQSRCYHAGDNSYVDANWLYRFLFGGPGGSLESCK* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1444 320 Pfam Neprosin 193 312 IPR004314 -
Vvi4g1444 320 Pfam Neprosin activation peptide 47 134 IPR025521 -
Vvi4g1444 320 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 33 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1444 Vvi-Chr4 21501186 21504309 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1444 - - vvi:104879198 384.415