Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1436 ATGGCTCGAAATGAAGAGAAAGCGCAGTCGATGCTCAATAGATTCATCACGCTCAAGAACGAAGAAAAGAAGAAGCCCAAAGAGCGCCGCCCCTACCTCGCCTCCGAGTGTCGTGACCTCGCCGAGGCCGACAAATGGCGCCAACAGATCATGCGCGAGATTGGCCGGAAAGTCGCCGAGATCCAGAACGAAGGCCTAGGCGAGCACCGCCTCCGAGATCTCAACGACGAGATCAACAAACTCATCCGCGAAAAGTCCCATTGGGAGCGCCGAATAATCGAATTGGGCGGCCCCAATTACACGAAACACTCCGCCAAAATGACTGATTTGGAAGGCAATATTGTCGATGTTCCTAACCCTAGCGGCCGCGGCCCCGGCTACCGTTACTTCGGTGCGGCGAAGAAACTCCCCGGAGTTCGAGAGTTGTTCGAGAAGCCGCCGGAGTTGAGGAAGAGAAAGTCACGGTACGATATATACAAGCGAATTGATGCGAGCTATTATGGGTACAGGGATGATGAGGATGGTGTGTTGGAGAAGGTGGAGGGACCGGCGGAGGAGCGGATGAGGGCAGCCAAGTTGGCAGAGTGGGAGGCATTGGAGGAGATAAAGAGGGAGGCGCGGAGGGCGGTGAAGAGCGGTGAGGTGGCGAGTGTGGCACCGGCAGGGATATTGTTTGAGGAGGAGGAGGATGTGGTGGAGGAGGAGAGGCAGGCGGCCAGGGAAAAGGAAAACGAGAAAGAGAGAGAGTTTGTGGTGCACGTACCCCTGCCTGATGAGAAGGAAATTGAGAGGATGGTGGTGGAGAAGAAGAAGATGGAGCTCTTGAGCAAGTATACCAGCGAGGGGCTTTTGGAGGAGCAGACCGAGGCTAAAGCTATGCTTAATATTCAGCGATAA 897 0.5496 MARNEEKAQSMLNRFITLKNEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKVEGPAEERMRAAKLAEWEALEEIKREARRAVKSGEVASVAPAGILFEEEEDVVEEERQAAREKENEKEREFVVHVPLPDEKEIERMVVEKKKMELLSKYTSEGLLEEQTEAKAMLNIQR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1436 298 Coils Coil 71 91 - -
Vvi4g1436 298 SUPERFAMILY ISY1 domain-like 27 102 IPR037200 GO:0000350
Vvi4g1436 298 Coils Coil 224 249 - -
Vvi4g1436 298 Gene3D Helix hairpin bin 39 96 IPR029012 -
Vvi4g1436 298 PANTHER PRE-MRNA-SPLICING FACTOR ISY1 1 295 IPR009360 GO:0000350
Vvi4g1436 298 FunFam pre-mRNA-splicing factor ISY1 homolog 39 96 - -
Vvi4g1436 298 Pfam Isy1-like splicing family 1 277 IPR009360 GO:0000350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1436 K12870 - vvi:100250525 550.051