Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1435 ATGGCCACTAAGCTTGTTCAACCACCAGTCCCTGCTTCCCACGTGGCTCCTCCAATACCCAGACTCACAAAAATGATGAGAGCTCACAGACCGGTTTCAGCCACTCATTCAGGGTCCCGGAGGAGGTCCATATTTGGAGAGTTCCCATCTGGGTCTAGACCCTTCTACGCCATTAGAGTTGCAGAGCAGAGCCCCGGCCTAGTTGGGGATGACCAGGATATTGTAGTGAAGGAAGAAGAAGAAGAAGACGAACAAGAAGGAGCATCATCGGATGATAGGACGATTGCCAATGTAAAAGCAGATCTATACCAGGCAGTTCAAGGCATCAATAGGGGGGTTTTTGGAGTACCATCTGCAAAGAAATCTGAGATTGAAGCTCTGGTCAAGCTGCTAGAGTCTCAAAATCCAACTCCGGAACCTACTCTAAATCTAGACAAGGTAAATGGATGGTGGAAGCTTGTTTACAGCACAATAACAATATTGGGTTCCAAGAGAACGAAGCTAGGATTGAGAAATTTCATCACTCTGGGGGACTTTTTGCAGATTATTGATGTGGAAGAGGCCAAAGCAGTTAATGTGATCAAGTTCAACGCAAGGGGATTCAATTTCCTGAATGGGGAGCTGAAAATTGAGGCCTCCTTCAAGATTGCTTCCAAATCAAGGGTTGACATTAAGTATGACAGCTCCACCATCACTCCTGACAAGAACAAATAG 714 0.4594 MATKLVQPPVPASHVAPPIPRLTKMMRAHRPVSATHSGSRRRSIFGEFPSGSRPFYAIRVAEQSPGLVGDDQDIVVKEEEEEDEQEGASSDDRTIANVKADLYQAVQGINRGVFGVPSAKKSEIEALVKLLESQNPTPEPTLNLDKVNGWWKLVYSTITILGSKRTKLGLRNFITLGDFLQIIDVEEAKAVNVIKFNARGFNFLNGELKIEASFKIASKSRVDIKYDSSTITPDKNK* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1435 237 Pfam PAP_fibrillin 97 233 IPR006843 -
Vvi4g1435 237 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATED 70 234 IPR039633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1435 Vvi-Chr4 21371015 21372349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1435 29 231 Acyl Lipid Metabolism Gene Families AT4G22240 27.941 8.55e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1435 - - vvi:100267799 454.136