Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g1434 | ATGGGAGTGACAAAGGAAGACGTGGAATCTTCATTGACCTCTGTAATGAACCCTTCTCATCTGGCATTCTCAATAACTCCCTTCTCCTTTTCATATTCTCTGAGTGCCATAAATTTGATTCTCATATGGATTAATATTCTTAGTTTTTTTGTGTTTCAGGAAGTGATTGATACATCTGGTGGGTGTGGTGCAAGCTTTGCAATTGAAATTGTGTCAGAACAGTTTGAAGGGAAGAGGTTGCTGGAGAGGCATCGGATGGTGAATGCTGCACTGCAAGAGGAGTTGAAACAAATCCATGCTCTGTCGATAAAGAAAGCTCTGACCCCAGAGCAGTGGAAACAACAGCAAGAAGCTGAAAATTCTCAGCCTGCTGCTTAA | 378 | 0.4206 | MGVTKEDVESSLTSVMNPSHLAFSITPFSFSYSLSAINLILIWINILSFFVFQEVIDTSGGCGASFAIEIVSEQFEGKRLLERHRMVNAALQEELKQIHALSIKKALTPEQWKQQQEAENSQPAA* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g1434 | 125 | Gene3D | - | 2 | 123 | IPR036065 | - | |
| Vvi4g1434 | 125 | PIRSF | BolA | 46 | 125 | IPR002634 | - | |
| Vvi4g1434 | 125 | PIRSF | BolA | 1 | 26 | IPR002634 | - | |
| Vvi4g1434 | 125 | Pfam | BolA-like protein | 60 | 111 | IPR002634 | - | |
| Vvi4g1434 | 125 | SUPERFAMILY | BolA-like | 52 | 116 | IPR036065 | - | |
| Vvi4g1434 | 125 | PANTHER | BOLA-LIKE PROTEIN-RELATED | 1 | 117 | IPR045115 | GO:0051537|GO:0097428 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g1434 | Vvi-Chr4 | 21358661 | 21362496 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g1434 | - | K22075 | vvi:100245396 | 167.162 |