Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1431 ATGCAGGTTCCCAGATGGAGATATGTGTTCATTTCAAAGAATTCGTTGACCCCATTCTCAATAAGGGCAGCAATATCTTCTTCTTCCCACTTTGCTTCTTTTCATTCTACACCCGTTGCCTCTGAGAAGTGGAAGAACAAATGGAACCATGATTTTACAAGTCATCAGCCATCTAAGAATTATATCAGGTATGCATCACGTCAAAAGCGTACTGATGCAAGGAGAGCTTTGAAAGACCTCCTCTTCAATAATGGGTCTCCCAAATTTTCATTCCAGGATGAAGACTCAACTTGGAAAATAGATGGAGCAAGCAGCTGGGATGAAGAGGCTGAACATTCAGATAGCTCTAATAAGAAAGGTCGACCAAAGTCTTCTAATCGACGTGGTAGAAAAGCCCAGCACAACAGATTTAGACGTAAGTTTAGAAAAGATTATTTCTCTGAAGATGACTATTCTCCCGAGACAATCTTTCACGCAACGTTTGGGAATAGGAACAAATGGTGTACTTGGTCTTTCAACTCAGCGGGGTCATCTTCTTTCCAAAGTTCAACAAGCGCATTCGAGTGGAGGGGGCAGTCAAACCGGACCAACAATAGAAATAAAGAATGGGATACTGGCAGTGAAACTGAGTCTGATGGTGAGTCATGTGTTGTTGGCTCATATTCTGATAGAAGAATGCTGGGTCTGCCTCCAACAGGTCCTCTAAAGATCGAAGACGTCAAAAATGCTTTCCGTTTATCTGCTCTAAAATGGCATCCTGATAAACATCAAGGCCCTTCACAGGCAACAGCAGAAGAGAAATTCAAACTGTGTGTCAATGCATACAAATCATTGTGCAATGCTCTCTCCACAGTTTAA 858 0.4207 MQVPRWRYVFISKNSLTPFSIRAAISSSSHFASFHSTPVASEKWKNKWNHDFTSHQPSKNYIRYASRQKRTDARRALKDLLFNNGSPKFSFQDEDSTWKIDGASSWDEEAEHSDSSNKKGRPKSSNRRGRKAQHNRFRRKFRKDYFSEDDYSPETIFHATFGNRNKWCTWSFNSAGSSSFQSSTSAFEWRGQSNRTNNRNKEWDTGSETESDGESCVVGSYSDRRMLGLPPTGPLKIEDVKNAFRLSALKWHPDKHQGPSQATAEEKFKLCVNAYKSLCNALSTV* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1431 285 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 25 283 - -
Vvi4g1431 285 MobiDBLite consensus disorder prediction 191 215 - -
Vvi4g1431 285 Gene3D DnaJ domain 194 283 IPR036869 -
Vvi4g1431 285 ProSiteProfiles dnaJ domain profile. 222 283 IPR001623 -
Vvi4g1431 285 SMART dnaj_3 221 283 IPR001623 -
Vvi4g1431 285 MobiDBLite consensus disorder prediction 108 135 - -
Vvi4g1431 285 Pfam DnaJ domain 226 280 IPR001623 -
Vvi4g1431 285 CDD DnaJ 227 280 IPR001623 -
Vvi4g1431 285 SUPERFAMILY Chaperone J-domain 169 280 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1431 Vvi-Chr4 21277236 21300122 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1431 - - vvi:100267710 569.311