Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1404 ATGGAGCGGATAGCAGAGGAAGAAGTTGTGATAGTGGGGGCTGGAATAGCAGGGTTGGCGACGGCGGTGGCGCTCAAAAGAGTGGGGATTAGAGCATTGGTGTTGGAGAGGTCTGATTGCCTCCGAGCCACTGGTGCTGCTCTCACCCTCTTCCCAAATGCTTGGCGCGCTCTCGATGCCCTGGGCGTCTCTCATAAACTCACTCCCCTTTACGCCGTCCGCGAAAAGTCGTACGTAACAAATGTTACGACTGGAGCTATCCAAGAAGTCTCCTTGAGTAGAAACAATAGAGGTGGACCCATCACAGTACATCGCAAGGCGTTACTAGAGAGTCTAGCAGAGGAGCTGCCAAGCAACTCAATCCGATTCTCATCTAAGCTCATCTCCTTTGAAGTCGAGGCCCAGGCCGAAGAAGGTCTATACATCATACGCTTGGAAGATGGAACTGTGATTACAGCCAAGGTTTTGATAGGGTGTGATGGGGTGCACTCGTTGGTGGCTCGTAAATTGGGACTGGCCGAGCCGGTGAACTCGGGTCGATCGGCTGTGCGTGGGCTCGCGGTGTTTCAAGAGGGTCATGGGTTGGGTGATGAAGTGCAGCAATTTTTGGATGTGAACATAAGGGCTGGCATGGTCCCTCTTAATGATAAAGAGATTTACTGGTTCCTCACTTTCAAATCTACTCTTCAAGGTGAGGCCATGGCAAGAGACCCAGAACAAATACAAAGACAAGTGATTGAGAATTTTGCTAAGAACTTCCCTCCGACATACGCTGAAGTGGTCCGCCACTGCGATCTTTCTACCTTGACATGGGCTCCACTGTTAATGAGACTTCCATGGCACCTCATTTTTGGAAATGTAAGCAAAGGGACGATGACCGTGGCAGGTGATGCCATGCACCCCATGACCCCTGACCTAGGCCAGGGTGGCTGCTCAGCCCTGGAGGACGCAGTTGTCCTAGGCCGCCACATCGGAAACTCATTCATTGATAACGGAAGGCTGGTGCCGGGAGCGGTGGCCGGAGCCATAGAGGGGTACGTGAAGGAAAGGAGGTGGCGCACAACTGGGCTGATAACGGGGTCATATATATCAGGGTGGGCGCAGTTAGGTGGAGATGGATGGTTGATGAAGTTGTTCAGAGACGTGATATTCTATAGGTTCATTTTCAAGAGGCTTGTTGGTGGCGCAGATTATGACTGCGGGAAGCTCCCTCTATTGAATGAACAAAATAAACCTCAGTAG 1242 0.5153 MERIAEEEVVIVGAGIAGLATAVALKRVGIRALVLERSDCLRATGAALTLFPNAWRALDALGVSHKLTPLYAVREKSYVTNVTTGAIQEVSLSRNNRGGPITVHRKALLESLAEELPSNSIRFSSKLISFEVEAQAEEGLYIIRLEDGTVITAKVLIGCDGVHSLVARKLGLAEPVNSGRSAVRGLAVFQEGHGLGDEVQQFLDVNIRAGMVPLNDKEIYWFLTFKSTLQGEAMARDPEQIQRQVIENFAKNFPPTYAEVVRHCDLSTLTWAPLLMRLPWHLIFGNVSKGTMTVAGDAMHPMTPDLGQGGCSALEDAVVLGRHIGNSFIDNGRLVPGAVAGAIEGYVKERRWRTTGLITGSYISGWAQLGGDGWLMKLFRDVIFYRFIFKRLVGGADYDCGKLPLLNEQNKPQ* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1404 413 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 - -
Vvi4g1404 413 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Vvi4g1404 413 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 - -
Vvi4g1404 413 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 - -
Vvi4g1404 413 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 6 403 IPR044560 -
Vvi4g1404 413 SUPERFAMILY FAD/NAD(P)-binding domain 8 385 IPR036188 -
Vvi4g1404 413 Pfam FAD binding domain 8 326 IPR002938 GO:0071949
Vvi4g1404 413 Gene3D - 7 375 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1404 Vvi-Chr4 20960509 20962850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1404 1 403 Miscellaneous Gene Families AT5G05320 39.078 3.58e-98 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1404 - - vvi:100266095 818.92