Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1395 ATGGCTTACTCTTTCAAGTGCTTTTTTCTCGTAGTTATATATATGTTGACGCGGACAACAGCATCCATGGTCATGGTGCGACCTCTCGACTCAATGCCAAACCTCCAAGCACGACTACGACTGGAAGGAGAGTCCCCGAATTGTTGGGACTCTTTGTTTGAGCTCCAATCTTGCACTAGTGAAGTTATCATGTTCTTCCTCAATGGCGAGACACATCTTGGTCCCAATTGCTGTCGTGCCATCCGCATCATAGAACAACAGTGCTGGCCCGCCTTGCTCACTTTGCTAGGCTTCACCCCCCAGGAAGAAGATATTCTCCGCGGCTACTGCGATGCTACTGACTCCACCCCTACACCACTGCCCCCACCACCACATCCTGTGGATCCCACTTTCACCATCTCCCACCATTTCATCCCATAA 420 0.5048 MAYSFKCFFLVVIYMLTRTTASMVMVRPLDSMPNLQARLRLEGESPNCWDSLFELQSCTSEVIMFFLNGETHLGPNCCRAIRIIEQQCWPALLTLLGFTPQEEDILRGYCDATDSTPTPLPPPPHPVDPTFTISHHFIP* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1395 139 Pfam Prolamin-like 47 111 IPR008502 -
Vvi4g1395 139 PANTHER EGG CELL-SECRETED PROTEIN 1.5 1 124 IPR044711 GO:0009567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1395 Vvi-Chr4 20883072 20883491 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1395 - - vvi:104879201 235.343