Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1389 ATGGCAGGTCCCGGTAAATGCTTCCTCGTTACTGGCCCTCCTGGCGTGGGTAAGACCACTCTGATCATGAGGGTGCTGGAGACTCTCAAAATCTCAAACCCTAATTTGAAGGTTCAGGGTTTCTACACTAGCGAGGTGAGAGAAGCCAGTGAAAGAGTTGGGTTCCAAGTGGTTACATTAGATGGTCGCAAGGGACCTCTCGCCTCTTCTATTTCCAGCCCAGAGTCTCTAAGATGGCCTAGTGTTGGGAAGTACAGAGTGGATATAGCATCCTTTGAGGCATTAGCGTTGCCCGAGTTGCAGGTGAAAGAAGACACTGATCTTTTCATCATCGACGAGGTTGGTAAAATGGAGCTGTTCAGTTCATCATTCTTTCCTGCTGTTCTAAGAGTTCTGGAATCAAATATTCCAGTTTTGGCCTCCATCCCAATTCCAAAATTCAGCCGAGATATACCTGGAGTTGCACGGTTGAGGAATCATCCAGGAGCAACAATTTTCACTTTGAACACCGGCAACAGGGATTTTGTTAAAGAACAGATTTACTCCCAACTCAGAGACTTACTACAGAAGCATTAG 576 0.4618 MAGPGKCFLVTGPPGVGKTTLIMRVLETLKISNPNLKVQGFYTSEVREASERVGFQVVTLDGRKGPLASSISSPESLRWPSVGKYRVDIASFEALALPELQVKEDTDLFIIDEVGKMELFSSSFFPAVLRVLESNIPVLASIPIPKFSRDIPGVARLRNHPGATIFTLNTGNRDFVKEQIYSQLRDLLQKH* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1389 191 CDD RecA-like_Thep1 8 181 - -
Vvi4g1389 191 Gene3D - 6 187 IPR027417 -
Vvi4g1389 191 Pfam NTPase 8 180 IPR004948 GO:0017111
Vvi4g1389 191 PANTHER CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE 5 189 IPR004948 GO:0017111
Vvi4g1389 191 SMART AAA_5 4 157 IPR003593 GO:0016887
Vvi4g1389 191 Hamap Nucleoside-triphosphatase <locus_tag>. 6 188 IPR004948 GO:0017111
Vvi4g1389 191 ProSiteProfiles Guanylate kinase-like domain profile. 5 189 IPR008144 -
Vvi4g1389 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 183 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1389 K06928 - vvi:100255709 377.096