Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1369 ATGCCTCTTCTCCAGGGAGAAACGCCGGATTTTTCTGCTTCCAAATCCATGGAGTATCGAATGGAGAAGTTGTTTCCTGTTTATGCCATGGGTCTCTCCAAGGCCAACGTGGGGGGAGATGTTTCGCTTGAAATTTTGGATTCTATTGTGGGTGACCCGATCTGGGACGCTGTGAGGGAGGAGGCCAAGTTGGAGGCGGAGAAGGAGCCAATTCTAAGTAGCTTCTTGTATGCCAGTATTTTGTCCCATGACTGTTTAGAGCAAGCATTGGCATTTGTTCTTGCAAATCGACTTCATAACCTGACACTCTTGGCAACACAATTGATGGATATAATTGGTAAGGTGATACTGAATGATAGGGATATTCAACGTGCAATTCGCCTAGATATGCAGGCATTTAAAGATAGAGATCCTTCTTGTTTGTCGCATTGCTCGGTTTTGTTGTATCTTAAGGGTTATCATTCTCTGCAATCATATCGAGTAGCACATGCCTTATGGAACCATGGGCGTAAAGAGTTGGCATTAGCATTACAAAGTCGGATCAGTGAGGTTTTTGGAGTTGACATCCATCCAGCTGCACAAATTGGAGAGGAAATACTTCTGGATCATGCAACAGGCGTGGTTATAGGTGAAACTGCTGTTGTAGGAAATAGAGTTTCATTAATGCAGGGAGTAACTTTAGGAGGAAGTGGAAAAGAAATCGGTGATCGTCATCCAAAAGTTGCTCAAGGAGCACTAATTGGAGCTAGTGCGACTATACTTGGGAATATAAAAATAGGTGAAGGTGCCATGATAGCTGCTGGTTCCCTTGTATTAAAAGATGTTCCACCTCATAGCATGGTGGCAGGAATACCGGCAAGGTTGATTGGACATGTACATGAGCAAGATCCATCTCTAACTATGAAGCATGATGCCACCAAAGACTACTTTGAACATGCTATGGATGGACAATCTACTGGGGCTATGGATGCGACAAGAAATGACAAAGAAACTTAA 996 0.4347 MPLLQGETPDFSASKSMEYRMEKLFPVYAMGLSKANVGGDVSLEILDSIVGDPIWDAVREEAKLEAEKEPILSSFLYASILSHDCLEQALAFVLANRLHNLTLLATQLMDIIGKVILNDRDIQRAIRLDMQAFKDRDPSCLSHCSVLLYLKGYHSLQSYRVAHALWNHGRKELALALQSRISEVFGVDIHPAAQIGEEILLDHATGVVIGETAVVGNRVSLMQGVTLGGSGKEIGDRHPKVAQGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHSMVAGIPARLIGHVHEQDPSLTMKHDATKDYFEHAMDGQSTGAMDATRNDKET* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1369 331 Pfam Serine acetyltransferase, N-terminal 54 158 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vvi4g1369 331 FunFam Serine acetyltransferase 188 309 - -
Vvi4g1369 331 NCBIfam serine O-acetyltransferase 126 287 IPR005881 GO:0005737|GO:0006535|GO:0009001
Vvi4g1369 331 FunFam Serine acetyltransferase 4 40 187 - -
Vvi4g1369 331 Gene3D serine acetyltransferase, domain 1 41 187 IPR042122 -
Vvi4g1369 331 CDD LbH_SAT 185 285 IPR045304 -
Vvi4g1369 331 Pfam Bacterial transferase hexapeptide (six repeats) 239 271 IPR001451 -
Vvi4g1369 331 PANTHER SERINE ACETYLTRANSFERASE 50 313 - -
Vvi4g1369 331 SUPERFAMILY Trimeric LpxA-like enzymes 53 302 IPR011004 -
Vvi4g1369 331 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 247 275 IPR018357 GO:0016740
Vvi4g1369 331 Gene3D Hexapeptide repeat proteins 188 317 - -
Vvi4g1369 331 SMART SATase_N_2_a 54 158 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1369 Vvi-Chr4 20557182 20561960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1369 18 320 Miscellaneous Gene Families AT2G17640 69.707 1.92e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1369 K00640 - vvi:100233047 652.514