Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1364 ATGAGTGGATATCTTAAAGATGAGAAAGCAACAGAAGAAGCTTTCAGGGGTGGATGGTTTCGAAGTGGGGATCTTGCTGTAAAACATCCAGATGGGTACATAGAAATGAAAGATCGCTTGAAGGATATCATTATTTCTGGAGGGGAGAATATAAGCACTGTTGAGGTTGAAACAGTGTTGTATAATCATCCAGCAATTCTTGAGGCTGCAGTTGTTGCACGGCCAGATAATCATTGGGGCCAAACACCCTGTGCTTTTGTGAAGTTGAAGGAGGGATTTGATGTTGATGCTCAAGAAATACTCAAGTTCTGCCGGGATCATTTGCCACATTACATGGCACCCAAGACAGTTATTTTTGAGGATCTTCCAAGAACCTCCACCGGAAAGATTCAAAAGTTTATTCTAAGGGAGAAAGCAAAGGCCTTGGGTAGCCTTTCCTGA 441 0.4263 MSGYLKDEKATEEAFRGGWFRSGDLAVKHPDGYIEMKDRLKDIIISGGENISTVEVETVLYNHPAILEAAVVARPDNHWGQTPCAFVKLKEGFDVDAQEILKFCRDHLPHYMAPKTVIFEDLPRTSTGKIQKFILREKAKALGSLS* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1364 146 Gene3D Luciferase; Domain 3 1 44 - -
Vvi4g1364 146 Gene3D - 45 142 IPR045851 -
Vvi4g1364 146 PANTHER ACYL-ACTIVATING ENZYME 1 144 - -
Vvi4g1364 146 FunFam 2,3-dihydroxybenzoate-AMP ligase 41 143 - -
Vvi4g1364 146 Pfam AMP-binding enzyme C-terminal domain 55 129 IPR025110 -
Vvi4g1364 146 SUPERFAMILY Acetyl-CoA synthetase-like 1 140 - -
Vvi4g1364 146 Pfam AMP-binding enzyme 1 46 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1364 Vvi-Chr4 20507825 20508265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1364 1 146 Miscellaneous Gene Families AT1G20560 71.233 1.63e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1364 - - vvi:100853847 300.441