Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1363 ATGGATCGGAGATGTTCATCGTGGCCTTTGGGTCTTCTCACTTTGATCTTGGCTCCAGTTGCAGCAGCCATGCTTCTCTACCAACTCGACCCCTATCACCCAGCTCCTGTCCCCATCCACGAGTTTTCACAGCAACCCATGGTCGTGCCCAAGCACAACTCTCGTATGCTACAAGGATCGGAGATGACTGGGGTTGGGAAGCTTTTGGGTCCAGAGGACATTGCCTACCATCCCGACTCACACCTCATCTACACCGGTTGTGCTGATGGCTGGGTCAAGCGAGTCACCTTGAACGATTCCGTGGTGCAGAACTGGGCTTTCACCGGAGGACGACCCCTCGGCGTCGCTCTCGGCCGCCACGGTCAGCTGATCGTCGCTGATGCCGAAAAGGGTCTATTGGAGGTAACTACAGATGGTATGGTGAAGACGTTGACCGATGAGGCTGAGGGTATAAAATTCAAACTAACCGACGGTGTGGATGTGGCGGTTGATGGCATGATTTATTTTACAGATGCTTCCTATAAATATAGCTTGAAAGAATACATTTGGGACATTTTAGAGGGTAGGCCCCATGGTAGACTAATGAGTTTTGACCCATCAACTAAAGAGACCAAAGTGCTGGTTCGGGACCTGTTCTTCGCTAATGGAGTTATCGTCTCACCCGATCAAAATTCCGTGATATTCTGTGAAAGTGTCATGAAAATGTGCTTAAAATATTACATACAAGATGAAAGAAAGGATCCATGGATAAGTTCATCGATAATTTATCGGGTACACCTGATAATATTCTATATGATGGCGAAGGACATTATTGGATTGCATTACCCATGGGAAACTCATTGGCTTGGGATCTGGCATTGA 861 0.4774 MDRRCSSWPLGLLTLILAPVAAAMLLYQLDPYHPAPVPIHEFSQQPMVVPKHNSRMLQGSEMTGVGKLLGPEDIAYHPDSHLIYTGCADGWVKRVTLNDSVVQNWAFTGGRPLGVALGRHGQLIVADAEKGLLEVTTDGMVKTLTDEAEGIKFKLTDGVDVAVDGMIYFTDASYKYSLKEYIWDILEGRPHGRLMSFDPSTKETKVLVRDLFFANGVIVSPDQNSVIFCESVMKMCLKYYIQDERKDPWISSSIIYRVHLIIFYMMAKDIIGLHYPWETHWLGIWH* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1363 286 PANTHER STRICTOSIDINE SYNTHASE-RELATED 18 246 - -
Vvi4g1363 286 Gene3D - 54 251 IPR011042 -
Vvi4g1363 286 Pfam Strictosidine synthase 157 243 IPR018119 GO:0009058|GO:0016844
Vvi4g1363 286 SUPERFAMILY Calcium-dependent phosphotriesterase 29 247 - -
Vvi4g1363 286 FunFam Uncharacterized protein 54 251 - -
Vvi4g1363 286 Pfam Strictosidine synthase-like, N-terminal 57 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1363 Vvi-Chr4 20501808 20503627 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1363 - - vvi:104879170 486.108