Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1362 ATGGCAGACTCAACGCCTTCTCAGAGTAGCATGGATCGGAGAAGCTCATCGTGGCCTTTGGGTCTTCTCACTTTGATCTTGGCTCCAGTTGCAGCAGCCATGCTTCTCTACCAACTCGACCCCTATGACCCAGCTCCTGTCCCCATCCACGAGTTTTCACAGCAACCCATGGTCGTGCCCAAGCTCAACCCTCGCATGCTACAAGGATCGGAGATGATTGGGGTTGGGAAGCTTTTGAGTCCAGAGGACATTGCCTATCATCCCGACTCACACCTCATCTATACCGGTTGTGATGATGGCTGGGTCAAGCGAATCACCTTGAACGATTCCATGGTACAGAACTGGGCTTTCACCGGAGGACGACCCCTCGGCGTGGCTCTCGGCCGCCACGGTCAACTTGTTGTCGCTGATGCCGAAAAGGGTCTATTGGAGGTAACTGCAGACGGTATGGTGAAGACGTTGACCGATGAGGCTGAGGGTCTAAAATTCAAGCTAACTGATGGTGTGGATGTGGCGGTTGATGGCATGATTTATTTCACAGATGCTTCCTATAAATATGGCTTGAAAGAACATATTCGGGACATTTTGGAGGGTAGGCCCCATGGTAGACTAATGAGTTTTGACCCATCAACTAAAGAGACCAAAGTGCTGGTTCGCGACCTGTTCTTCGCTAATGGAGTTGTCGTCTCACCTGATCAAAATTCTGTGATAGTATGTGAAAGTGTCATGAGAAGGTGCTTAAAATACCACATACAAGGTGAAAGAAAAGGATCAGTGGACAAGTTCATTGATAATTTACCGGGTCCACCTGACAATATCCTATACGATGGCGAAGGACATTATTGGATTGCATTGCCTATGGGAAACTCATTGGCTTGGGATTTGGCATTGAAATATCCTTGGATCCGAAAGGTTGTGGCAATCATGGAGAGGTACAAAGTAAGGCCTCATATAGAGAAAAATGGAGGGGTTTTGGCTGTTGATTTGGAAGGAAAACCAACTGCATATTATTATGATCCTAGTTTGTCAGAGGTTACAAGTGGAGTGAAGATTGGGAATTATTTATATTGCGGTTCCATTACAAAACCCTACATGATCCGCCTTGATCTTCATCAACATGCTGCGCGTGCCACCATGTGA 1140 0.4711 MADSTPSQSSMDRRSSSWPLGLLTLILAPVAAAMLLYQLDPYDPAPVPIHEFSQQPMVVPKLNPRMLQGSEMIGVGKLLSPEDIAYHPDSHLIYTGCDDGWVKRITLNDSMVQNWAFTGGRPLGVALGRHGQLVVADAEKGLLEVTADGMVKTLTDEAEGLKFKLTDGVDVAVDGMIYFTDASYKYGLKEHIRDILEGRPHGRLMSFDPSTKETKVLVRDLFFANGVVVSPDQNSVIVCESVMRRCLKYHIQGERKGSVDKFIDNLPGPPDNILYDGEGHYWIALPMGNSLAWDLALKYPWIRKVVAIMERYKVRPHIEKNGGVLAVDLEGKPTAYYYDPSLSEVTSGVKIGNYLYCGSITKPYMIRLDLHQHAARATM* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1362 379 Pfam Strictosidine synthase-like, N-terminal 67 105 - -
Vvi4g1362 379 PANTHER STRICTOSIDINE SYNTHASE-RELATED 28 361 - -
Vvi4g1362 379 Pfam Strictosidine synthase 167 254 IPR018119 GO:0009058|GO:0016844
Vvi4g1362 379 SUPERFAMILY Calcium-dependent phosphotriesterase 35 370 - -
Vvi4g1362 379 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 6 67 372 - -
Vvi4g1362 379 Gene3D - 67 377 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1362 Vvi-Chr4 20496420 20500460 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1362 - - vvi:100245229 764.222