Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1361 ATGAACCCGTTTTTCAAGAATTCACTGATTCGATGCATTTTTAGTCTGAACCGGCTTCATCCAAATCTCAGTCACGATTCTCGACGATTCTGTCACTTTTCCGGGGATATCGGACCTGGGTCATGGAAATCAACGGAGGGTCTGGTTCGATGCCCGGTGAATGACGTGCCCCTGTCTCCTATAACCTTCTTGGAGCGGTCAGCAACGGCTTACAGAGACAGAACCTCAGTTGTGTATGGGTCTGTGAAGTATACTTGGAGCGAGACTCAAGAACGGTGTCTCAAATTGGCCTCTGCTCTCACCCAGTTGGGGATTTCGCGAGGCGACGTTGTTGCAGTATTGGCCCCCAACGTTCCAGCAATGTATGAGCTTCATTTCGGGGTCCCAATGGCTGGAGCTGTTCTTTGTACACTTAATACACGGCACAATTCAGCCATGGTGTCAACCCTGCTTCGTCATTCGGAAGCCAAGATCATATTTGTAGACTACCAATTACTTGAAATTGCTCATGTAGCACTTGATCTTCTAAAGAAGACAGAAACAAAACCACCCATCTTGGTCTTAATTGTAGAATCTGATGGCTCACCCCCCACCAACTTCAGTACTTCTGACGGCTATGAATATGAGAGTCTCCTTGCAACTGGACAATCTGAATTTGAGATCAGGCGGCCCATAGATGAGTGGGATCCAATCAGTGTTAATTATACTTCTGGCACAACATCCAGTCCCAAAGGAGTCGTTTACAATCACAGAGGTGCCTATCTCAATTCCCTTGCAACCTTTGTTCTCCATGGAATGGGCTCAATGCCTGTCTACCTCTGGACGGTGCCTATGTTCCACTGTAACGGATGGTGCCTGCCTTGGGGAGTGGCAGCTCAAGGTGGCACCAACGTATGCCTTAGGCGTGTCATCCCAAAGGACATATTTGACAGCATCGCTCTCCACAAAGTCACCCACATGGGCGGGGCACCAACTGTGTTGAACATGATTGTGAATTCACCAGTCAGTGACCGGAGGCCTCTTCCTTCCAAGGTGGAAGTAATGACAGGTGGTTCGCCACCACCTCCGCCCATACTTCGCAAGATGGAGGAGCTGGGCTTCGGTGTATCACACTTATATGGCCTTACAGAAACTTATGGTCCGGGAACATTTGCACATGGAAACCCGAGTGGGATTCTCTGCCTCCTGATGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGATTATTTGACATAA 1881 0.3137 MNPFFKNSLIRCIFSLNRLHPNLSHDSRRFCHFSGDIGPGSWKSTEGLVRCPVNDVPLSPITFLERSATAYRDRTSVVYGSVKYTWSETQERCLKLASALTQLGISRGDVVAVLAPNVPAMYELHFGVPMAGAVLCTLNTRHNSAMVSTLLRHSEAKIIFVDYQLLEIAHVALDLLKKTETKPPILVLIVESDGSPPTNFSTSDGYEYESLLATGQSEFEIRRPIDEWDPISVNYTSGTTSSPKGVVYNHRGAYLNSLATFVLHGMGSMPVYLWTVPMFHCNGWCLPWGVAAQGGTNVCLRRVIPKDIFDSIALHKVTHMGGAPTVLNMIVNSPVSDRRPLPSKVEVMTGGSPPPPPILRKMEELGFGVSHLYGLTETYGPGTFAHGNPSGILCLLMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDYLT* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1361 626 SUPERFAMILY Acetyl-CoA synthetase-like 40 388 - -
Vvi4g1361 626 Pfam AMP-binding enzyme 64 384 IPR000873 -
Vvi4g1361 626 PANTHER ACYL-ACTIVATING ENZYME 47 385 - -
Vvi4g1361 626 Coils Coil 396 398 - -
Vvi4g1361 626 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
Vvi4g1361 626 Gene3D - 48 392 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1361 Vvi-Chr4 20478861 20481237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1361 121 390 Miscellaneous Gene Families AT1G20560 62.362 2.03e-114 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1361 - - vvi:100853691 805.053