Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g1360 | ATGAGTTTTGACCCATCAACTAAAGAGACCAAAGTGCTGGTTCGGGACCTGTTCTTCGCTAATGGAGTTATCGTCTCACCCGATCAAAATTCCGTGATATTCTGTGAAAGTGTCATGAAAATGTGCTTAAAATATTACATACAAGGTGAAAGAAAAGGATCCATGGATAAGTTCATCGATAATTTATCGGGTACACCTGATAATATTCTATATGATGGCGAAGGACATTATTGGATTGCATTACCCATGGGAAACTCATTGGCTTGGGATTTGGCATTGAAATATCCTTGGATCCGGAAGGTTGTGGCAATCATGGAAAGGTACAAAGTAAGGCCTCATATGGAGAAAAATGGAGGGGTTTTGGTTGTTGATTTGGAAGGAAATCCAACTGCATATTATTATGATCTTGGTTTGTCAGAGGTTACAAGTGGAGTGAAGATTGGAAATCATTTATATTGCGGTTCTATTACCACACGCTACATGATCCGACTTGATATTCATCAACATGCTGCGCGTGCCACCATGTGA | 528 | 0.3996 | MSFDPSTKETKVLVRDLFFANGVIVSPDQNSVIFCESVMKMCLKYYIQGERKGSMDKFIDNLSGTPDNILYDGEGHYWIALPMGNSLAWDLALKYPWIRKVVAIMERYKVRPHMEKNGGVLVVDLEGNPTAYYYDLGLSEVTSGVKIGNHLYCGSITTRYMIRLDIHQHAARATM* | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g1360 | 175 | SUPERFAMILY | Calcium-dependent phosphotriesterase | 2 | 165 | - | - | |
| Vvi4g1360 | 175 | PANTHER | STRICTOSIDINE SYNTHASE-RELATED | 1 | 157 | - | - | |
| Vvi4g1360 | 175 | Gene3D | - | 1 | 173 | IPR011042 | - | |
| Vvi4g1360 | 175 | Pfam | Strictosidine synthase | 1 | 50 | IPR018119 | GO:0009058|GO:0016844 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g1360 | Vvi-Chr4 | 20475612 | 20476579 | Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g1360 | - | - | vvi:104879170 | 363.999 |