Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1359 ATGGCAGACCCAACGCCTTCTCAGAGTAGCATGGCTCGGAGAAGCTCATCGTGGCCTTTGGGTCTTCTCACTTTGATCTTGGCTCCAGTTGCAGCAGCCATGCTTCTCTACCAACTCGACCCCTATGACCCAGCTCCTGTCCCCATCCACGAGTTTTCACAGCAACCCATGGTCGTGCCCAAGCTCAACTCTCGTATGCTACAAGGATCGGAGATGATTGGGGTTGGGAAGCTTTTGGGTCCAGAGGACATTGCCTACCATCCCGACTCACACCTCATCTACACCGGTTGTGCTGATGGCTGGGTCAAGCGAGTCACCTTGAACGATTCCGTGGTGCAGAACTGGGCTTTCACCGGAGGACGACCCCTCGGCGTCGCTCTCGGCCGCCACGGTCAGCTGATCGTCGCTGATGCCGAAAAGGGTCTATTGGAGGTAACTACAGATGGTATGGTGAAGACGTTGACCGATGAGGCTGAGGGTATAAAATTCAAACTAACCGACGGTGTGGATGTCGCGGTTGATGGCGTGATTTATTTTACGGATGCTTCCTATAAATATAGCTTGAAAGAATACATTTGGGACATTTTTTAG 591 0.5228 MADPTPSQSSMARRSSSWPLGLLTLILAPVAAAMLLYQLDPYDPAPVPIHEFSQQPMVVPKLNSRMLQGSEMIGVGKLLGPEDIAYHPDSHLIYTGCADGWVKRVTLNDSVVQNWAFTGGRPLGVALGRHGQLIVADAEKGLLEVTTDGMVKTLTDEAEGIKFKLTDGVDVAVDGVIYFTDASYKYSLKEYIWDIF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1359 196 Gene3D - 64 196 IPR011042 -
Vvi4g1359 196 Pfam Strictosidine synthase-like, N-terminal 67 105 - -
Vvi4g1359 196 PANTHER STRICTOSIDINE SYNTHASE-RELATED 28 193 - -
Vvi4g1359 196 SUPERFAMILY Calcium-dependent phosphotriesterase 36 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1359 Vvi-Chr4 20474492 20475588 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1359 - - vvi:104879170 377.096