Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1356 ATGGTACAGAACTGGGCTTTCACCGGAGGACGACCCCTCGGCGTGGCTCTCGGCCGCCACGGTCAGCTTGTTGTCGCTGATGCCGAAAAGGGTCTATTGGAGGTAACTGCAGACGGTATGGTGAAGACGTTGACCGATGAGGCTGAGGGTCTAAAATTCAAGCTAACTAATGGTGTGGATGTGGCGGTTGATGGCATGATTTATTTCACAGATGCTTCCTATAAATATGGCTTGAAAGAACATATTCGGGACATTTTGGAGGGTAGGCCCCATGGTAGACTAATGAGTTTTGACCCATCAACTGAAGAGACCAAAGTGCTGGTTCGCGACCTGTTCTTCGCTAATGGAGTTGTCGTCTCACCTGATCAAAATTCTGTGATAGTATGTGAAAGTGTCATGAGAAGGTGCTTAAAATACCACATACAAGGTGAAAGAAAAGGATCGATGGACAAGTTCATCGATAATTTACCGGGTCCACCTGACAATATCCTATACGATGGCGAAGGACATTATTGGATTGCATTGCCTATGGGAAACTCATTGGCTTGGGATTTGGCATTGAAATATCCCTGGATCCGAAAGGTTGTGGCAATCATGGAGAGGTACAAAGTAAGGCCTCATATAGAGAAAAATGGAGGGGTTTTGGCTGTTGATTTGGAAGGAAAACCAACTGCATATTATCATGATCCTGGTTTGTCAGAGGTTTCAAGTGGAGTGAAAATCGGGAATTATTTATATTGCGGTTCCGTTGCAAAACCCTACATGATCCGCCTTGATCTTCATCAACATGTTGCGCGTGCCACCATGTGA 810 0.4543 MVQNWAFTGGRPLGVALGRHGQLVVADAEKGLLEVTADGMVKTLTDEAEGLKFKLTNGVDVAVDGMIYFTDASYKYGLKEHIRDILEGRPHGRLMSFDPSTEETKVLVRDLFFANGVVVSPDQNSVIVCESVMRRCLKYHIQGERKGSMDKFIDNLPGPPDNILYDGEGHYWIALPMGNSLAWDLALKYPWIRKVVAIMERYKVRPHIEKNGGVLAVDLEGKPTAYYHDPGLSEVSSGVKIGNYLYCGSVAKPYMIRLDLHQHVARATM* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1356 269 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 6 1 262 - -
Vvi4g1356 269 PANTHER STRICTOSIDINE SYNTHASE-RELATED 9 251 - -
Vvi4g1356 269 Gene3D - 3 267 IPR011042 -
Vvi4g1356 269 Pfam Strictosidine synthase 57 144 IPR018119 GO:0009058|GO:0016844
Vvi4g1356 269 SUPERFAMILY Calcium-dependent phosphotriesterase 8 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1356 Vvi-Chr4 20460180 20462036 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1356 - - vvi:100853656 553.903