Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1355 ATGGCTAAGTCAAAGCCTTCAGATCCTAACACCACTAGGAAGAGCTCATCATGGTCTTTGGCTCTTCTTATCTCCATTCTTACTCCCGTTGCAGCGGCCATCTTTCTCTACCAACTCGACTCCTTTGATCCCGCTTCTCTGCCCACTCACGTGTTTTCACAGGAACCCATGTCTGTCCCCAGGATCAACTCTCGTCTGCTGCATGAATCTGAGATGATCGGGCTTGGGAAGCTGTTGGGTCCAGAGGACATAGCCTATGATACCAACTCACACCTAATCTACACAGGCTGTGCTGATGGCTGGATTAAGAAAGTCACCTTGAACGACTCGGCTGTCAACTCGGTCGTTCATGACTGGGCCTTCACCGGTGGAAGACCTCTCGGCGTCGTTCTCGGTCGCGCCGGTGAGGTTCTCGTTGCCGACGCCGACAAGGGTCTACTGGAGATAAGTGAAGATGGTGTGGTCAAACTGTTGACCGATGAGGCTGAGGGCATAGGATTCAAACTAACGGACGCTGTGGATGTAGCCGTTGATGGTATGATTTATTTTACAGATGCTTCCTATAAATACAGTTTGAAAGATTTCATATGGGACATATTGGAGGGTAGGCCCCATGGTAGACTACTGAGCTTTGACCCATCAACGCAAGAGACAAAAGTGCTGGTTCGTGATCTCTACTTTGCTAATGGTGTTGTCGTCTCACCTGATCAGACGTTCCTGATCTTTTGCGAAACCTTCATGAAAAGGTGTTCGAAATACTATATACAAGGTGAGCGAAAGGGATCTGTGGACAAATTCATTGATAATTTGCCTGGTATGCCCGACAACATCTTATATGATGGGGAAGGCCATTATTGGATTGGATTAGCCACGGGATACAATGATCTTTGGGACTTAGCACTCAAATATCCTTCAATTCGAAAGATTATGGCAATCATGGAGAGGTTTATCGGGAGGCCAGAATTCGAGAAAAATGGTGGGGTTCTAGCAATTGATTTGGAAGGAAAACCGATTGCTCACTATTATGATCCTAAATTATCATTAATGTCAAGTGGGATCAAGATTGACAAGTATTTATATTGTGGTTTTGTTGTTAAACCCTACATGATTCGCCTTGATCTTGATCAACATGCTGCTCGCACCACCTTGTAA 1152 0.4575 MAKSKPSDPNTTRKSSSWSLALLISILTPVAAAIFLYQLDSFDPASLPTHVFSQEPMSVPRINSRLLHESEMIGLGKLLGPEDIAYDTNSHLIYTGCADGWIKKVTLNDSAVNSVVHDWAFTGGRPLGVVLGRAGEVLVADADKGLLEISEDGVVKLLTDEAEGIGFKLTDAVDVAVDGMIYFTDASYKYSLKDFIWDILEGRPHGRLLSFDPSTQETKVLVRDLYFANGVVVSPDQTFLIFCETFMKRCSKYYIQGERKGSVDKFIDNLPGMPDNILYDGEGHYWIGLATGYNDLWDLALKYPSIRKIMAIMERFIGRPEFEKNGGVLAIDLEGKPIAHYYDPKLSLMSSGIKIDKYLYCGFVVKPYMIRLDLDQHAARTTL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1355 383 Pfam Strictosidine synthase-like, N-terminal 67 103 - -
Vvi4g1355 383 Pfam Strictosidine synthase 171 258 IPR018119 GO:0009058|GO:0016844
Vvi4g1355 383 Gene3D - 64 330 IPR011042 -
Vvi4g1355 383 SUPERFAMILY Calcium-dependent phosphotriesterase 66 367 - -
Vvi4g1355 383 PANTHER STRICTOSIDINE SYNTHASE-RELATED 26 365 - -
Vvi4g1355 383 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 6 67 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1355 Vvi-Chr4 20452250 20454129 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1355 - - vvi:100249006 772.696