Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1341 ATGGGAGTGCAGCAAGTTATCTGCATGAAAGGAGGTGTCGGAGAGGGAAGCTATGCCCGTAACTCCAAATCACAGGCTGCATTACTATCCAAGTCCATGCCCCTGCTGGAGCAAGCAGTGCTAGATTTATGTTGCACCACCTTACCTGAGAGTGTCGCCATAGCAGACCTTGGCTGTTCATCGGGCCCAAATACTTTTTTCGCGGTCTCCGAAATCATGACCATCATCTACAGGAGGTGTCGCCAACTAGGCCGGTCACCACCAGGTTTTTGGGTGTTCTTGAATGATCTTCCAGGGAATGACTTCAATGCTGTGTTCAAGTCATTGCCAACATTCCATGAAAAGATGAAGGAAGAAAATGGACAGGAGTTTGGGCCATGTCATGTTGCTGCTGTTCCGGGTTCTTTCTACCACAAGCTTTTTCCATCCAGGAGACTACACTTTGTGCACTCTTCTTGCAGTCTCCATTGGCTGTCCCAGGTTCCTCCAGAGCTTCTTAACAAGCAAATTACAAACAAGGGGAAGATTTATCTTTCAAAAACAAGCTCACCGGCCCTCATAGATGCTTACGCATCTCAGTTCCAGAGGGATTTCTCTTTGTTTCTTAAGTTGAGATCAGAAGAAACAGTCCCCGGAGGACGCATGGTTTTGTCGCTCATGGCCAGACGAACCCCAGACCCTGTCTCAGATGAGAGTTGTCTGTTGTGGGATCTATTAGCACAGGCGTTGCAGGGGTTGGTTTCAGAGGGGCTTATTGCAGAGGAGAAATTAGATTCCTACAATGCACCATACTATCAACCTTACACAGAGGACCTAGAAACTGGGATAGAGAATGATGGATCCTTTAGCATCAACGGCCTTGAGATCATGGTCTTACCATGGGACAGTGCCAGTGGTGGACAAAATTATGATAGGCCAACAACCGCCCAGAAGATTGCAAAGTCGATGAAAGCAGTGCAAGAGCCGATGTTGGCAAGTCATTTCGGGGCAGAAATCATGGACCCTTTGTTTAAAAGGCTCATGGAGATCATTGCAGCAGATACAAGGGAGGTGGAGCATGTTTCTGTCCTTGTTTCCATGACCAGAAAGGCTTGA 1095 0.4758 MGVQQVICMKGGVGEGSYARNSKSQAALLSKSMPLLEQAVLDLCCTTLPESVAIADLGCSSGPNTFFAVSEIMTIIYRRCRQLGRSPPGFWVFLNDLPGNDFNAVFKSLPTFHEKMKEENGQEFGPCHVAAVPGSFYHKLFPSRRLHFVHSSCSLHWLSQVPPELLNKQITNKGKIYLSKTSSPALIDAYASQFQRDFSLFLKLRSEETVPGGRMVLSLMARRTPDPVSDESCLLWDLLAQALQGLVSEGLIAEEKLDSYNAPYYQPYTEDLETGIENDGSFSINGLEIMVLPWDSASGGQNYDRPTTAQKIAKSMKAVQEPMLASHFGAEIMDPLFKRLMEIIAADTREVEHVSVLVSMTRKA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1341 364 FunFam Jasmonate O-methyltransferase, putative 31 162 - -
Vvi4g1341 364 Gene3D Vaccinia Virus protein VP39 21 293 IPR029063 -
Vvi4g1341 364 Gene3D - 6 348 IPR042086 -
Vvi4g1341 364 Pfam SAM dependent carboxyl methyltransferase 39 362 IPR005299 GO:0008168
Vvi4g1341 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 363 IPR029063 -
Vvi4g1341 364 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 347 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1341 Vvi-Chr4 20315481 20318581 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1341 K08241 K21483 vvi:100255863 733.406