Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1339 ATGTCAATGCCCCTGCTGGAGCAAGCAGTGCTAGATTTATGTTGCACCACCTTACCTGAGAGTGTCGCCATAGCAGGCCTTGGCTGTTCATCAGGCCCAAATACCTTTTGCGCCGTCTCCGAAATCGTGACCATCATCTACAAGAGGTGCTGTCAACTAGGCCGGTCACCACCAAGATTTTGGGTTTTCTCGAATGATCTTCCAGGGAATGACTTCAATTCTGTGTTCAAGTCATTGCTAGCATTCCATGAAAAGATGAGGGGGAAAAATGGAGAGGAGTTTGGGCCATGTCATGTTGCTGCAGTTCCGGCTTCTTTCTACCACAAGCTTGCTCCACCCAGAACACTACAATTTGTGTACTCTGCTTGCAGTCTCCATTGGCTTTCCCAGGTTCCTCCGGAGCTTCTTAACAAGCAAATTTCAAACAAGGGGAAGATTTAA 441 0.4762 MSMPLLEQAVLDLCCTTLPESVAIAGLGCSSGPNTFCAVSEIVTIIYKRCCQLGRSPPRFWVFSNDLPGNDFNSVFKSLLAFHEKMRGKNGEEFGPCHVAAVPASFYHKLAPPRTLQFVYSACSLHWLSQVPPELLNKQISNKGKI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1339 146 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 145 IPR029063 -
Vvi4g1339 146 Gene3D Vaccinia Virus protein VP39 1 146 IPR029063 -
Vvi4g1339 146 Pfam SAM dependent carboxyl methyltransferase 9 146 IPR005299 GO:0008168
Vvi4g1339 146 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 146 IPR005299 GO:0008168
Vvi4g1339 146 FunFam Jasmonate O-methyltransferase, putative 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1339 Vvi-Chr4 20310407 20310911 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1339 K08241 K21483 vvi:100255863 259.61