Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1329 ATGGCCAGATACGATAGGGCGATTACAGTCTTCTCACCAGATGGTCATCTCTTTCAGGTCGAGTACGCTCTCGAAGCCGTCCGTAAAGGCAACGCCGCCGTCGGCGTCCGCGGCACCGACACCATCGTTCTCGGCGTCGAGAAAAAGTCCACCGCCAAACTCCAAGATTCCAGAACAGTTAGGAAGATTGTTAACCTGGATGATCACATTGCACTGGCCTGTGCTGGGCTCAAGGCAGATGCTCGAGTCCTAATTAACAGAGCACGGATTGAATGCCAAAGCCACAGACTTACTGTTGAGGACCCTGTAACTGTTGAGTATATTACACGCTATATCGCGGGTCTTCAGCAAAAGTACACACAGAGCGGTGGTGTGAGACCATTTGGCCTTTCAACTTTGATTGTGGGCTTTGATCCATACACTGGTGTGCCATCTCTATATCAGACGGATCCATCAGGGACATTTTCTGCTTGGAAAGCTAATGCAACTGGGAGAAACTCTAATTCGATGAGGGAGTTCCTGGAGAAGAACTATAAAGAAACTTCCGGGCAAGAAACTGTGAAGCTTGCAATTCGTGCATTGCTTGAAGTGGTTGAGAGTGGAGGAAAGAACATAGAAATTGCTGTGATGACGAGGGAGCATGGTCTGCGGCAACTTGATGAGGCTGAAATTGATGCCATTGTTGCTGAGATTGAAGCAGAGAAGGCTGCTGCCGAGGCTGCAAAGAAGGGCCCTCCAAAGGATACATGA 750 0.492 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDSRTVRKIVNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEIAVMTREHGLRQLDEAEIDAIVAEIEAEKAAAEAAKKGPPKDT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1329 249 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 245 IPR029055 -
Vvi4g1329 249 ProSitePatterns Proteasome alpha-type subunits signature. 4 26 IPR000426 GO:0006511|GO:0019773
Vvi4g1329 249 ProSiteProfiles Proteasome alpha-type subunit profile. 19 228 IPR023332 -
Vvi4g1329 249 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 234 IPR029055 -
Vvi4g1329 249 CDD proteasome_alpha_type_7 4 210 - -
Vvi4g1329 249 FunFam Proteasome subunit alpha type-4 1 241 - -
Vvi4g1329 249 Coils Coil 219 239 - -
Vvi4g1329 249 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 8 233 - -
Vvi4g1329 249 SMART Proteasome_A_N_2 4 26 IPR000426 GO:0006511|GO:0019773
Vvi4g1329 249 Pfam Proteasome subunit 27 210 IPR001353 GO:0005839|GO:0051603
Vvi4g1329 249 Pfam Proteasome subunit A N-terminal signature 4 26 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1329 Vvi-Chr4 20239126 20242038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1329 K02731 - vvi:100262480 453.366