Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1327 ATGGCTTCCCAAAACCCTAACCCTAACAAACCAAACTCTCTGTATCCTGAGATCATCCAAGCGGACCCTCCTCCCTTCATCTCAAACCCGAATTCTTCATCTTCCTCTCTCTATCCTTCCATCGACATGAGAGACTTGGTCGAAAATCTCTTCCCAGAAAACCCTCACCCTACTGCTCCTCCTGAATCCCTTGAAGAGGTTCTCGTCATGTTACCCGGCGTCATCCTCCACCTCATCGACAAGCAGTACAGCGTCGAGCTCGCATCCGGCGATCTATCTATCATTCGTCTCTGGCAGGGGAATAACATTGTCGCCGTTCTCGCCCGCGTCGGCCAGGAGATCCAGTGGCCGTTGGCCAAAGATGAGGCGTCGGTGAAGGTTGACGGCTCGCATTACTTCTTCTCTCTTCGCGCAATGAAGGAGAATGGATCGGGGTCGGATTCGAGCGATGATGAGGGGAACGAAGGGGAGAATCGGTTGAATTATGGTTTGACGATTGTGCCCAAGGGACAGGAGCCATTGGTGGAGATGTTGGATGGAATTTTGGAGCATTACAGCAGTTTTACCAAGGTGGTGGACGTATCAAAGGAGGGGATGGAGGTGTTGGAAGTTAAGTTGTCGCCGTTGGAGAAGGACAAGGAGTTGTCGGAAGAAAGGAGCTCTGCGTACTGGACGACATTGGCACCTAATGTGGAGGATTATAGTGGGACTGCAGCCAGGTTGATTGCTGCCGGATCTGGGCAGCTGGTCAAGGGGATTTTGTGGTGTGGGGATGTGACCGTGGATAGGTTGAAATGGGGGAATGAGTTTTTGAAGAAAAGGATGTCGCCTGCTTCCAACACGGAGATTAGTCCCCAAACTATGAAGAATATGAAAAGGGTAGAGAGAGTCACATTGGTGACTGAGAAAGTAGCTACTGGGGTCCTCTCTGGAGTTGTGAAGGTTTCTGGATTCTTCACAGGTTCTGTGGCAAACTCAAGAGTTGGCAAGAAATTTTTTGGCTTCATGCCTGGAGAAATGGTCCTTGCTTCTCTGGATGGATTTAGTAAGGTCTGTGATGCGGTTGAAGTAGCCGGAAGGAATGTTATGTCAACATCATCCACTGTGACCACTGGACTTGTGTCACATAGGTATGGGGAGCAAGCAGGTCAGGCAACAAATACAGGGCTTGATGCTGCAGGTCATGCTGTAGGGGCTGCATGGGCTGTTTTTAAGATCCGGAAAGCTTTCAACCCAAAAAGTGTTATTAAACCTACCAGCCTGGCTGCTGCTAAAGCTGCTGCAGCTGAGAAGGTGGCTAAGAGATCCAAGTAA 1314 0.4992 MASQNPNPNKPNSLYPEIIQADPPPFISNPNSSSSSLYPSIDMRDLVENLFPENPHPTAPPESLEEVLVMLPGVILHLIDKQYSVELASGDLSIIRLWQGNNIVAVLARVGQEIQWPLAKDEASVKVDGSHYFFSLRAMKENGSGSDSSDDEGNEGENRLNYGLTIVPKGQEPLVEMLDGILEHYSSFTKVVDVSKEGMEVLEVKLSPLEKDKELSEERSSAYWTTLAPNVEDYSGTAARLIAAGSGQLVKGILWCGDVTVDRLKWGNEFLKKRMSPASNTEISPQTMKNMKRVERVTLVTEKVATGVLSGVVKVSGFFTGSVANSRVGKKFFGFMPGEMVLASLDGFSKVCDAVEVAGRNVMSTSSTVTTGLVSHRYGEQAGQATNTGLDAAGHAVGAAWAVFKIRKAFNPKSVIKPTSLAAAKAAAAEKVAKRSK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1327 437 MobiDBLite consensus disorder prediction 1 33 - -
Vvi4g1327 437 Pfam Senescence domain 241 414 IPR009686 -
Vvi4g1327 437 PANTHER SPARTIN 10 432 IPR045036 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1327 Vvi-Chr4 20219970 20223806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1327 K19366 - vvi:100241964 786.949